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Pharmacophore Analysis of Monoterpene Melaleuca leucadendra as an Inhibitor for 3CLPro of the SARS-CoV-2

Jurnal Biodjati · Vol. 7 No. 2 (2022) · hlm. 259–267

DOI
10.15575/biodjati.v7i2.20496
ISSN
2541-4208, 2548-1606
Terbit
2022-11-30
Penerbit
UIN Sunan Gunung Djati Bandung
Bahasa
eng

Abstrak

The monoterpene compound has been reported to have antiviral activities. This study aimed to test the monoterpene compound in Melaleuca leucadendra to inhibit the SARS-CoV-2 virus. The monoterpenes tested were α-Pinene, β-Pinene, Linalool, α-Terpineol, and Terpinene-4-Ol. The method used was computational through pharmacophore analysis. The indicator for the quality of the compound was the fit score. A fit score of more than 50% indicates a good-quality compound, while a fit score of less than that indicates a poor-quality compound. Based on the analysis results, the monoterpene compound in Melaleuca leucadendra can potentially inhibit the SARS-CoV-2 virus directly through the inhibition of 3C-like protease. The linalool showed a fit score of 55% with interactions of hydrophobic, electrostatic, and hydrogen bonds. All the compounds did not inhibit the metabolic process and were safe, possibly having no side effects based on ADMET analysis.

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Iman HernamanPadjadjaran University3
Astuti KusumoriniAfiliasi tidak diketahui3
Tri CahyantoAfiliasi tidak diketahui2
Ateng SupriyatnaAfiliasi tidak diketahui2
sumiyati Sa’adahAfiliasi tidak diketahui2
Rahmat Taufiq Mustahiq AkbarAfiliasi tidak diketahui2
Ahmad Zaenal EpendiAfiliasi tidak diketahui2
Fauziah Qurota AyuniAfiliasi tidak diketahui2
Muhammad YusufUniversitas Halu Oleo2
Toto SubrotoAfiliasi tidak diketahui2
Sukma NuswantaraAfiliasi tidak diketahui2
Dina AmaliaAfiliasi tidak diketahui2
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Adisty Virakawugi DarniwaAfiliasi tidak diketahui1
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Sumber metadata: OAI-PMH (metadata jurnal) https://journal.uinsgd.ac.id/index.php/biodjati/oai, pertama di-harvest 7 Nov 2026, terakhir terlihat 8 Nov 2026.
Metadata asli (oai_dc)
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	<dc:title xml:lang="en-US">Pharmacophore Analysis of Monoterpene Melaleuca leucadendra as an Inhibitor for 3CLPro of the SARS-CoV-2</dc:title>
	<dc:creator>Syarifah, Ismi Farah</dc:creator>
	<dc:creator>Suryani, Yani</dc:creator>
	<dc:creator>Adzani, Ghea Gema</dc:creator>
	<dc:creator>Kurniawan, Isma Dwi</dc:creator>
	<dc:creator>Taupiqurrohman, Opik</dc:creator>
	<dc:subject xml:lang="en-US">Pharmacophore</dc:subject>
	<dc:subject xml:lang="en-US">monoterpene</dc:subject>
	<dc:subject xml:lang="en-US">Melaleuca Leucadendra</dc:subject>
	<dc:subject xml:lang="en-US">Sars CoV-2</dc:subject>
	<dc:description xml:lang="en-US">The monoterpene compound has been reported to have antiviral activities . This study aimed to test the monoterpene compound in Melaleuca leucadendra to inhibit the SARS-CoV-2 virus. The monoterpenes tested were α-Pinene, β-Pinene, Linalool, α-Terpineol, and Terpinene-4-Ol. The method used was computational through pharmacophore analysis. The indicator for the quality of the compound was the fit score. A fit score of more than 50% indicates a good-quality compound, while a fit score of less than that indicates a  poor-quality compound. Based on the analysis results, the monoterpene compound in Melaleuca leucadendra can potentially inhibit the SARS-CoV-2 virus directly through the inhibition of 3C-like protease. The linalool showed a fit score of 55% with interactions of hydrophobic, electrostatic, and hydrogen bonds. All the compounds did not inhibit the metabolic process and were safe, possibly having no side effects based on ADMET analysis.</dc:description>
	<dc:publisher xml:lang="en-US">UIN Sunan Gunung Djati Bandung</dc:publisher>
	<dc:date>2022-11-30</dc:date>
	<dc:type>info:eu-repo/semantics/article</dc:type>
	<dc:type>info:eu-repo/semantics/publishedVersion</dc:type>
	<dc:type xml:lang="en-US">Peer-reviewed Article</dc:type>
	<dc:format>application/pdf</dc:format>
	<dc:identifier>https://journal.uinsgd.ac.id/index.php/biodjati/article/view/20496</dc:identifier>
	<dc:identifier>10.15575/biodjati.v7i2.20496</dc:identifier>
	<dc:source xml:lang="en-US">Jurnal Biodjati; Vol. 7 No. 2 (2022): November; 259-267</dc:source>
	<dc:source xml:lang="id-ID">Jurnal Biodjati; Vol 7 No 2 (2022): November; 259-267</dc:source>
	<dc:source>2541-4208</dc:source>
	<dc:source>2548-1606</dc:source>
	<dc:language>eng</dc:language>
	<dc:relation>https://journal.uinsgd.ac.id/index.php/biodjati/article/view/20496/7853</dc:relation>
	<dc:rights xml:lang="en-US">Copyright (c) 2022 Jurnal Biodjati</dc:rights>
</oai_dc:dc>