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Molecular Diversity Analysis of Katokkon Chili (Capsicum annum var. chinense) Based on Inter Simple Sequence Repeat (ISSR) Markers

AGRIVITA, Journal of Agricultural Science · Vol. 46 No. 2 (2024) · hlm. 238–249

DOI
10.17503/agrivita.v46i2.3997
ISSN
2477-8516, 0126-0537
Terbit
2024-05-16
Penerbit
Faculty of Agriculture University of Brawijaya in collaboration with PERAGI
Bahasa
eng
Lisensi
creativecommons.org/licenses/by-nc/4.0

Abstrak

There are numerous kinds of chilies, and many have a specialty and specific growing location, such as the katokkon chili, which is specific to Toraja Highland, South Sulawesi Province, Indonesia. This small bell-chili pepper-shaped chili has a distinctive capsicum aroma and a short burning sensation of hot chili's strong spicy taste. This research aims to study the relationship of the genetic kinship of katokkon chili from Toraja and its surrounding regency (Enrekang and Mamasa regencies) using ISSR molecular markers, which are expected to be used as basic information in genetic resource management. Inter Simple Sequences Repeat (ISSR) markers are used for the molecular analysis of 26 katokkon accessions. The result shows that katokkon chili analyzed have a relatively high heterozygosity value of 0.488. The average heterozygosity value is 0.5. Hence, the genetic diversity in these districts is comparatively high. The katokkon chili accession is grouped into three main clusters, each comprising various samples. Only clusters II and III have a close relationship. Information on the genetic diversity based on ISSR can be used as a molecular marker to support further research on the breeding and development of katokkon chili plants and their accession.

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  • Hasanuddin University
  • Universitas Halu Oleo
  • Universitas Muhammadiyah Sidenreng Rappang
  • Musamus Merauke University
  • East–West Center
  • Diponegoro University
  • Universitas Gadjah Mada
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Rekan penulisOrganisasiArtikel bersama
M RiadiHasanuddin University11
Syatrianty Andi SyaifulHasanuddin University5
Astina TambungHasanuddin University5
Nurlina KasimHasanuddin University4
RafiuddinAfiliasi tidak diketahui4
Novaty Eny DunggaHasanuddin University4
Nurhaya Jahidin PangaMusamus Merauke University4
Ifayanti RidwanHasanuddin University3
Asmiaty SahurHasanuddin University3
Elkawakib Syam’unHasanuddin University2
Fachirah UlfaHasanuddin University2
G GusmiatyHasanuddin University2
A. R. TrisnawatyUniversitas Muhammadiyah Sidenreng Rappang2
Nurul HasfiDiponegoro University1
Ahsan YunusHasanuddin University1
Muhammad Alif K. SahideHasanuddin University1
Micah R. FisherEast–West Center1
Emban Ibnurusyd Mas’udAfiliasi tidak diketahui1
Fatwa FaturachmatHasanuddin University1
Ahmad MaryudiUniversitas Gadjah Mada1
Hamirul HadiniUniversitas Halu Oleo1
MIRZA ARSIATY ARSYADUniversitas Halu Oleo1
Waode Siti Anima HiseinUniversitas Halu Oleo1
Dirvamena BoerUniversitas Halu Oleo1
NAWIR NAWIRUniversitas Halu Oleo1
SUAIB SUAIBUniversitas Halu Oleo1
Sylvia SjamHasanuddin University1
Muh. JayadiHasanuddin University1
Pipi DiansariAfiliasi tidak diketahui1
NurfaidaAfiliasi tidak diketahui1
Katriani MantjaHasanuddin University1
Muh. FariedAfiliasi tidak diketahui1
A Rusdayani AminAfiliasi tidak diketahui1
Baharuddin AsisAfiliasi tidak diketahui1
Rahmat SadliAfiliasi tidak diketahui1
St.Aminah AminahAfiliasi tidak diketahui1

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Sumber metadata: OAI-PMH (metadata jurnal) https://agrivita.ub.ac.id/index.php/agrivita/oai, pertama di-harvest 8 Nov 2026, terakhir terlihat 8 Nov 2026.
Metadata asli (oai_dc) 
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	<dc:title xml:lang="en-US">Molecular Diversity Analysis of Katokkon Chili (Capsicum annum var. chinense) Based on Inter Simple Sequence Repeat (ISSR) Markers</dc:title>
	<dc:creator>Al Amanah, Hafizhah</dc:creator>
	<dc:creator>Sjahril, Rinaldi</dc:creator>
	<dc:creator>Haring, Feranita</dc:creator>
	<dc:creator>Larekeng, Siti Halimah</dc:creator>
	<dc:subject xml:lang="en-US">agronomy; horticulture;</dc:subject>
	<dc:subject xml:lang="en-US">Capsicum; Conservation; Diversity; ISSR; Molecular</dc:subject>
	<dc:description xml:lang="en-US">There are numerous kinds of chilies, and many have a specialty and specific growing location, such as the katokkon chili, which is specific to Toraja Highland, South Sulawesi Province, Indonesia. This small bell-chili pepper-shaped chili has a distinctive capsicum aroma and a short burning sensation of hot chili's strong spicy taste. This research aims to study the relationship of the genetic kinship of katokkon chili from Toraja and its surrounding regency (Enrekang and Mamasa regencies) using ISSR molecular markers, which are expected to be used as basic information in genetic resource management. Inter Simple Sequences Repeat (ISSR) markers are used for the molecular analysis of 26 katokkon accessions. The result shows that katokkon chili analyzed have a relatively high heterozygosity value of 0.488. The average heterozygosity value is 0.5. Hence, the genetic diversity in these districts is comparatively high. The katokkon chili accession is grouped into three main clusters, each comprising various samples. Only clusters II and III have a close relationship. Information on the genetic diversity based on ISSR can be used as a molecular marker to support further research on the breeding and development of katokkon chili plants and their accession.</dc:description>
	<dc:publisher xml:lang="en-US">Faculty of Agriculture University of Brawijaya in collaboration with PERAGI</dc:publisher>
	<dc:contributor xml:lang="en-US"></dc:contributor>
	<dc:date>2024-05-16</dc:date>
	<dc:type>info:eu-repo/semantics/article</dc:type>
	<dc:type>info:eu-repo/semantics/publishedVersion</dc:type>
	<dc:type xml:lang="en-US">Peer-reviewed Article</dc:type>
	<dc:format>application/pdf</dc:format>
	<dc:identifier>https://agrivita.ub.ac.id/index.php/agrivita/article/view/3997</dc:identifier>
	<dc:identifier>10.17503/agrivita.v46i2.3997</dc:identifier>
	<dc:source xml:lang="en-US">AGRIVITA Journal of Agricultural Science; Vol 46, No 2 (2024); 238-249</dc:source>
	<dc:source>2477-8516</dc:source>
	<dc:source>0126-0537</dc:source>
	<dc:source>10.17503/agrivita.v46i2</dc:source>
	<dc:language>eng</dc:language>
	<dc:relation>https://agrivita.ub.ac.id/index.php/agrivita/article/view/3997/1710</dc:relation>
	<dc:relation>https://agrivita.ub.ac.id/index.php/agrivita/article/downloadSuppFile/3997/3165</dc:relation>
	<dc:relation>https://agrivita.ub.ac.id/index.php/agrivita/article/downloadSuppFile/3997/3166</dc:relation>
	<dc:rights xml:lang="en-US">Copyright (c) 2024 The Author(s)</dc:rights>
	<dc:rights xml:lang="en-US">http://creativecommons.org/licenses/by-nc/4.0</dc:rights>
</oai_dc:dc>