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Endophytic Fungi Isolated from the Mangrove Species Rhizophora apiculata and Their Efficacy as Herbicides

HAYATI Journal of Biosciences · Vol. 29 No. 5 (2022) · hlm. 605–620

DOI
10.4308/hjb.29.5.605-620
ISSN
2086-4094, 1978-3019
Terbit
2022-05-23
Penerbit
Bogor Agricultural University, Indonesia
Bahasa
eng

Abstrak

Endophytic fungi play an important role on mangrove growth and development, however research on the endophytic fungi of the mangrove Rhizophora apiculata is limited. The endophytic fungi produce diverse bioactive compounds involved in the mangrove’s adaptation to varied biotic and abiotic stresses and could have applied uses in agriculture or medicine. The purpose of this research was to isolate endophytic fungi of Rhizophora apiculata mangrove and to study their activity as herbicides on the weed Gomphrena globosa. The fungi were isolated using the surface sterilization method and identified based on morphological characteristics and molecular characteristics using ITS regions of rDNA. Herbicidal activity of the fungal filtrates extracted by ethyl acetate were tested on seed germination and seedling growth of G. globosa. Five fungal isolates were obtained, namely Penicillium citrinum, Diaporthe eucalyptorum, Diaporthe musigena, Colletotrichum queenslandicum, and Diaporthe tectonae. All isolates were able to grow on PDA medium containing 0, 25, 50, 75, and 100 (% v/v) seawater concentrations, but the growth rate varied by species and seawater concentration. In general, all five isolates showed herbicidal activity by delaying seed germination and reducing shoot and root growth. P. citrinum showed the highest herbicidal activity compared to the other isolates. Analysis using Gas Chromatography-Mass Spectrometry of the crude extract of P. citrinum filtrate identified 7 main compounds: 3-Methoxy-2-methyl-cyclohex-2-enone, Cyclohexane-carbohexaldehyde, 6-methyl-3-(1-methylethyl)-2-oxo, Cyclopropane carboxylic acid, 1-(2-propenyl)-1,1-dimethylethyl ester, 2-Hydroxy-4-isopropyl-7-methoxytropone, Beta-Asarone, Oxane, 4-(2-amino-1-hydroxyethyl)-4-(3,4-dimethoxyphenyl)-, and Diisooctyl-phthalate. These compounds should be studied further to determine which ones are responsible for the herbicidal activity.

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  • IPB University
  • National Research and Innovation Agency
  • Southeast Asian Regional Centre for Tropical Biology
  • University of Hawaiʻi at Mānoa
  • Atma Jaya Catholic University of Indonesia
  • Indonesian Institute of Sciences
  • Universitas Airlangga
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Rekan penulisOrganisasiArtikel bersama
Willy Bayuardi SuwarnoIPB University6
Latifah Kosim DarusmanIPB University5
Sri ListiyowatiIPB University4
Utut WidyastutiIPB University4
Rohani Cinta Badia GintingIPB University4
Dyah IswantiniIPB University4
Min RahminiwatiIPB University4
Wendi Nurul FadillahIPB University4
Novriyandi HanifIPB University4
M Reza PahleviIPB University3
Setyanto Tri WahyudiIPB University3
Hajrial AswidinnoorIPB University2
Nurul KhumaidaIPB University2
Utami Dyah SyafitriIPB University2
Muhammad Eka PrastyaNational Research and Innovation Agency2
Shadila Fira AsokaIPB University2
Kartini KramadibrataIndonesian Institute of Sciences2
Adi YulandiAtma Jaya Catholic University of Indonesia2
Bambang Sapta PurwokoIPB University2
Marisa Vidya LuthfianiIPB University2
Fikry AwaluddinIPB University2
Triadiati TriadiatiIPB University2
Munif GhulamahdiIPB University1
Yudhistira NugrahaNational Research and Innovation Agency1
Suwarno SuwarnoUniversitas Airlangga1
Muhamad SyukurIPB University1
Rahmi Henda YaniIPB University1
Indrastuti Apri RumantiNational Research and Innovation Agency1
Trias SitaresmiAfiliasi tidak diketahui1
Kemala S. NagurIPB University1
Ika RoostikaNational Research and Innovation Agency1
Jani MasterLampung University1
Ibnul QayimIPB University1
Indah Sukma WahyuniSoutheast Asian Regional Centre for Tropical Biology1

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Sumber metadata: OAI-PMH (metadata jurnal) http://journal.ipb.ac.id/index.php/hayati/oai, pertama di-harvest 8 Nov 2026, terakhir terlihat 8 Nov 2026.
Metadata asli (oai_dc)
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	<dc:title xml:lang="en">Endophytic Fungi Isolated from the Mangrove Species Rhizophora apiculata and Their Efficacy as Herbicides</dc:title>
	<dc:creator xml:lang="en">Julia, Za’aziza Ridha </dc:creator>
	<dc:creator xml:lang="en">Sukarno, Nampiah</dc:creator>
	<dc:creator xml:lang="en">Ardie, Sintho Wahyuning </dc:creator>
	<dc:creator xml:lang="en">Batubara, Irmanida </dc:creator>
	<dc:creator xml:lang="en">Tjitrosoedirdjo, Soekisman </dc:creator>
	<dc:creator xml:lang="en">Waite, Mashuri </dc:creator>
	<dc:description xml:lang="en">Endophytic fungi play an important role on mangrove growth and development, however research on the endophytic fungi of the mangrove Rhizophora apiculata is limited. The endophytic fungi produce diverse bioactive compounds involved in the mangrove’s adaptation to varied biotic and abiotic stresses and could have applied uses in agriculture or medicine. The purpose of this research was to isolate endophytic fungi of Rhizophora apiculata mangrove and to study their activity as herbicides on the weed Gomphrena globosa. The fungi were isolated using the surface sterilization method and identified based on morphological characteristics and molecular characteristics using ITS regions of rDNA. Herbicidal activity of the fungal filtrates extracted by ethyl acetate were tested on seed germination and seedling growth of G. globosa. Five fungal isolates were obtained, namely Penicillium citrinum, Diaporthe eucalyptorum, Diaporthe musigena, Colletotrichum queenslandicum, and Diaporthe tectonae. All isolates were able to grow on PDA medium containing 0, 25, 50, 75, and 100 (% v/v) seawater concentrations, but the growth rate varied by species and seawater concentration. In general, all five isolates showed herbicidal activity by delaying seed germination and reducing shoot and root growth. P. citrinum showed the highest herbicidal activity compared to the other isolates. Analysis using Gas Chromatography-Mass Spectrometry of the crude extract of P. citrinum filtrate identified 7 main compounds: 3-Methoxy-2-methyl-cyclohex-2-enone, Cyclohexane-carbohexaldehyde, 6-methyl-3-(1-methylethyl)-2-oxo, Cyclopropane carboxylic acid, 1-(2-propenyl)-1,1-dimethylethyl ester, 2-Hydroxy-4-isopropyl-7-methoxytropone, Beta-Asarone, Oxane, 4-(2-amino-1-hydroxyethyl)-4-(3,4-dimethoxyphenyl)-, and Diisooctyl-phthalate. These compounds should be studied further to determine which ones are responsible for the herbicidal activity.</dc:description>
	<dc:publisher xml:lang="en">Bogor Agricultural University, Indonesia</dc:publisher>
	<dc:date>2022-05-23</dc:date>
	<dc:type>info:eu-repo/semantics/article</dc:type>
	<dc:type>info:eu-repo/semantics/publishedVersion</dc:type>
	<dc:type xml:lang="en">Peer-reviewed Article</dc:type>
	<dc:format>application/pdf</dc:format>
	<dc:identifier>http://journal.ipb.ac.id/hayati/article/view/39172</dc:identifier>
	<dc:identifier>10.4308/hjb.29.5.605-620</dc:identifier>
	<dc:source xml:lang="en">HAYATI Journal of Biosciences; Vol. 29 No. 5 (2022): September 2022; 605-620</dc:source>
	<dc:source>2086-4094</dc:source>
	<dc:source>1978-3019</dc:source>
	<dc:language>eng</dc:language>
	<dc:relation>http://journal.ipb.ac.id/hayati/article/view/39172/23450</dc:relation>
	<dc:rights xml:lang="en">Copyright (c) 2022 Za’aziza Ridha  Julia, Nampiah Sukarno, Sintho Wahyuning  Ardie, Irmanida  Batubara, Soekisman  Tjitrosoedirdjo, Mashuri  Waite</dc:rights>
</oai_dc:dc>