Melola Discovery

← Melola Discovery

Jurnal SINTA 1

Cloning, Expression, and Bioinformatics Modeling of Human Papillomavirus Type 52 L1/L2 Chimeric Protein in Escherichia coli BL21 (DE3)

HAYATI Journal of Biosciences · Vol. 31 No. 5 (2024) · hlm. 891–902

DOI
10.4308/hjb.31.5.891-902
ISSN
2086-4094, 1978-3019
Terbit
2024-05-31
Penerbit
Bogor Agricultural University, Indonesia
Bahasa
eng

Abstrak

Human papillomavirus (HPV) L1 major capsid protein generates a highly immunogenic virus like particles (VLPs), which have been used as the main component of its prophylactic vaccine. However, the neutralizing antibodies against L1 VLPs are mostly type specific and may not be effective to prevent infection from different strains of HPV. On the other hand, HPV L2 minor capsid protein has low antigenic variation, thus can induce cross-neutralization. This study aims to obtain HPV 52 L1/L2 chimeric protein, which is designed based on HPV type 52 as one of the most circulated high-risk types in Indonesia, to develop a broad-spectrum HPV vaccine. Substitution of HPV 52 H4 helix L1 region with an HPV 52 L2 epitope was carried out using overlap extension PCR. HPV 52 L1/L2 chimeric gene was constructed into pET-SUMO expression vector and expressed in Escherichia coli BL21 (DE3). Bioinformatics modeling suggested that L2 epitope was located inside of the loop region in monomer form, and on the contrary, it was located outside of the pentamer surface. Furthermore, B cell and T cell epitopes predictions were conducted using Immune Epitope Database (IEDB) analysis. The B cell epitopes prediction revealed eleven potential epitopes, whereas the T cell epitopes prediction showed seven potential epitopes for each MHC class I and MHC class II. This study showed that HPV 52 L1/L2 chimeric protein has the potential to induce cross-neutralizing antibodies and can be developed as a promising candidate for a new HPV vaccine.

Jaringan kolaborasi para penulis

40 penulis · 166 tautan kepenulisan bersama · menampilkan 40 yang paling banyak terhubung

Arahkan kursor atau ketuk sebuah nama untuk menyorot rekan penulisnya. Klik dua kali untuk membuka halaman penulis.

  • Universitas Gadjah Mada
  • IPB University
  • Afiliasi tidak diketahui
  • Organisasi berbeda
  • Organisasi sama
  • Afiliasi tidak diketahui
  • Garis lebih tebal = lebih banyak artikel bersama · lingkaran lebih besar = lebih banyak artikel
Tampilkan sebagai tabel
Rekan penulisOrganisasiArtikel bersama
Herman IrawanAfiliasi tidak diketahui13
Nurlaili EkawatiAfiliasi tidak diketahui12
Sheila ChairunnisaAfiliasi tidak diketahui10
Maritsa NurfatwaAfiliasi tidak diketahui9
Ela NoviantiAfiliasi tidak diketahui9
Jendri MamangkeyAfiliasi tidak diketahui8
Baso ManguntungiAfiliasi tidak diketahui6
Sri SwasthikawatiAfiliasi tidak diketahui6
Bugi Ratno BudiartoAfiliasi tidak diketahui3
Nastiti WijayantiAfiliasi tidak diketahui3
Ratih Asmana NingrumAfiliasi tidak diketahui3
Iriani SetyaningsihIPB University3
Jaka WidadaUniversitas Gadjah Mada2
Kustiariyah TarmanIPB University2
Endang SaepudinAfiliasi tidak diketahui2
Anna Ida Sunaryo PurwiyantoAfiliasi tidak diketahui2
Anja MeryandiniAfiliasi tidak diketahui2
MelkiAfiliasi tidak diketahui2
Hera NirwatiAfiliasi tidak diketahui2
Farida J. RachmawatyAfiliasi tidak diketahui2
Marsetyawan H.N.E. SoesatyoAfiliasi tidak diketahui2
Muhammad RaihanAfiliasi tidak diketahui1
SubehanAfiliasi tidak diketahui1
HabibieAfiliasi tidak diketahui1
Nurhasni HasanAfiliasi tidak diketahui1
Sitti Nur FatimahAfiliasi tidak diketahui1
AnugerahAfiliasi tidak diketahui1
Jabal Rahmat HaedarAfiliasi tidak diketahui1
Hera MaheshwariAfiliasi tidak diketahui1
Amelia Ramadhani AnsharAfiliasi tidak diketahui1
Andhika Yudha PrawiraAfiliasi tidak diketahui1

Afiliasi berasal dari OpenAlex; metadata OAI-PMH jurnal tidak memuatnya. Penulis tanpa ID OpenAlex dicocokkan berdasarkan nama, sehingga dua orang bisa tergabung atau satu orang bisa terpisah.

Sumber metadata: OAI-PMH (metadata jurnal) http://journal.ipb.ac.id/index.php/hayati/oai, pertama di-harvest 8 Nov 2026, terakhir terlihat 8 Nov 2026.
Metadata asli (oai_dc)
<oai_dc:dc xmlns="http://www.openarchives.org/OAI/2.0/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/  http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
	<dc:title xml:lang="en">Cloning, Expression, and Bioinformatics Modeling of Human Papillomavirus Type 52 L1/L2 Chimeric Protein in Escherichia coli BL21 (DE3)</dc:title>
	<dc:creator xml:lang="en">Ikramullah, Muh. Chaeril</dc:creator>
	<dc:creator xml:lang="en">Mustopa, Apon Zaenal</dc:creator>
	<dc:creator xml:lang="en">Wibawa, Tri</dc:creator>
	<dc:creator xml:lang="en">Hertati, Ai</dc:creator>
	<dc:creator xml:lang="en">Umami, Rifqiyah Nur</dc:creator>
	<dc:creator xml:lang="en">Ratna, Lita Tri</dc:creator>
	<dc:creator xml:lang="en">Irawan, Shasmita</dc:creator>
	<dc:creator xml:lang="en">Firdaus, Moh Egy Rahman</dc:creator>
	<dc:creator xml:lang="en">Darusman, Huda Salahudin</dc:creator>
	<dc:description xml:lang="en">Human papillomavirus (HPV) L1 major capsid protein generates a highly immunogenic virus like particles (VLPs), which have been used as the main component of its prophylactic vaccine. However, the neutralizing antibodies against L1 VLPs are mostly type specific and may not be effective to prevent infection from different strains of HPV. On the other hand, HPV L2 minor capsid protein has low antigenic variation, thus can induce cross-neutralization. This study aims to obtain HPV 52 L1/L2 chimeric protein, which is designed based on HPV type 52 as one of the most circulated high-risk types in Indonesia, to develop a broad-spectrum HPV vaccine. Substitution of HPV 52 H4 helix L1 region with an HPV 52 L2 epitope was carried out using overlap extension PCR. HPV 52 L1/L2 chimeric gene was constructed into pET-SUMO expression vector and expressed in Escherichia coli BL21 (DE3). Bioinformatics modeling suggested that L2 epitope was located inside of the loop region in monomer form, and on the contrary, it was located outside of the pentamer surface. Furthermore, B cell and T cell epitopes predictions were conducted using Immune Epitope Database (IEDB) analysis. The B cell epitopes prediction revealed eleven potential epitopes, whereas the T cell epitopes prediction showed seven potential epitopes for each MHC class I and MHC class II. This study showed that HPV 52 L1/L2 chimeric protein has the potential to induce cross-neutralizing antibodies and can be developed as a promising candidate for a new HPV vaccine.</dc:description>
	<dc:publisher xml:lang="en">Bogor Agricultural University, Indonesia</dc:publisher>
	<dc:date>2024-05-31</dc:date>
	<dc:type>info:eu-repo/semantics/article</dc:type>
	<dc:type>info:eu-repo/semantics/publishedVersion</dc:type>
	<dc:type xml:lang="en">Peer-reviewed Article</dc:type>
	<dc:format>application/pdf</dc:format>
	<dc:identifier>http://journal.ipb.ac.id/hayati/article/view/54016</dc:identifier>
	<dc:identifier>10.4308/hjb.31.5.891-902</dc:identifier>
	<dc:source xml:lang="en">HAYATI Journal of Biosciences; Vol. 31 No. 5 (2024): September 2024; 891-902</dc:source>
	<dc:source>2086-4094</dc:source>
	<dc:source>1978-3019</dc:source>
	<dc:language>eng</dc:language>
	<dc:relation>http://journal.ipb.ac.id/hayati/article/view/54016/28181</dc:relation>
	<dc:rights xml:lang="en">Copyright (c) 2024 Muh. Chaeril Ikramullah, Apon Zaenal Mustopa, Tri Wibawa, Ai Hertati, Rifqiyah Nur Umami, Lita Tri Ratna, Shasmita Irawan, Moh Egy Rahman Firdaus, Huda Salahudin Darusman</dc:rights>
</oai_dc:dc>