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Morphological and Genetic Characteristics of Red Snapper (Lutjanidae) in Nabire Waters

ILMU KELAUTAN: Indonesian Journal of Marine Sciences · Vol. 30 No. 1 (2025) · hlm. 83–91

DOI
10.14710/ik.ijms.30.1.83-91
ISSN
2406-7598, 0853-7291
Terbit
2025-03-08
Penerbit
Marine Science Department Diponegoro University
Bahasa
eng
Lisensi
creativecommons.org/licenses/by-sa/4.0

Abstrak

The Lutjanidae family has a wide range of varieties, posing challenges in their morphological identification. Molecular identification is crucial for augmenting the current morphological data as a comprehensive database for documenting the presence of economically significant fish species in Nabire water. This article provides a comprehensive analysis of the morphological and genetic characteristics of red snapper species, as well as assessment of the evolutionary connections among snapper fish found in the water. This study aims to analyze the morphological and genetic characteristics of red snapper species and assess the evolutionary relationships among red snapper found in the sea waters. The DNA extraction procedure was conducted according to the instructions provided by the Geneaid gSYNC DNA extraction kit. The molecular marker used is the DNA barcode of the cytochrome oxidase subunit I (CO1) gene. A total of 29 individuals were identified, representing 8 species, namely Lutjanus timoriensis, Lutjanus gibbus, Lutjanus bohar, Lutjanus papuensis, Pinjalo lewisi, Etelis coruscans, Pristipomoides multidens, and Aphareus rutilans. The molecular analysis indicated that there was a fragment length of 620 base pairs (bp). P. multidens and L. gibbus had the greatest genetic distance (0.22), whilst the species L. bohar and L. gibbus had the smallest genetic distance (0.11). The phylogenetic tree reconstruction yielded 8 monophyletic clades. Based on morphological and genetic analysis, eight species of the Lutjanidae family were identified in Nabire waters. Research is needed on biological parameters such as size when first caught, optimum length of capture and size when first gonad mature.

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  • Universitas Papua
  • University of Brawijaya
  • National Research and Innovation Agency
  • Musamus Merauke University
  • Ministry of Environment and Forestry, Republic of Indonesia
  • Diponegoro University
  • National Sun Yat-sen University
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Rekan penulisOrganisasiArtikel bersama
Sipriyadi SipriyadiUniversity of Bengkulu8
Muhammad DailamiUniversity of Brawijaya7
Duaitd KolibongsoUniversitas Papua3
Lalu Panji Imam AgamawanCenderawasih University1
Dandi SalekyMusamus Merauke University1
Emmanuel ManangkulangiAfiliasi tidak diketahui1
Fanny F. C. SimatauwAfiliasi tidak diketahui1
Tutik HandayaniUniversitas Papua1
Yohanes AibesaUniversitas Papua1
Mudjirahayu MudjirahayuUniversitas Papua1
Fitriyah Irmawati Elyas SalehUniversitas Papua1
Tasya M.R. SihabudinUniversitas Papua1
Vera SabariahUniversitas Papua1
Yuli E. DemanaInstitut Agama Islam Al-Yasini Pasuruan1
Elly Airand RumayomiUniversitas Papua1
Gandi Y.S. PurbaUniversitas Papua1
Corazon Ell Merilia Papuani MayorUniversitas Papua1
Alberth W. RenyaanUniversitas Papua1
Caprio Dos SantusAfiliasi tidak diketahui1
Hendrik V. AyhuanUniversitas Papua1
Suhaemi SuhaemiUniversitas Papua1
Frida Aprilia LoinenakUniversitas Papua1
Dedi ParendenUniversitas Papua1
Novelina TampubolonUniversitas Papua1
Jesihando Rafael TulungUniversitas Papua1
Djanuar ArifinMinistry of Environment and Forestry, Republic of Indonesia1
Zulfa Rohadatul AisyMinistry of Environment and Forestry, Republic of Indonesia1
Jeremias Rumala TuhumenaMusamus Merauke University1
Luchman HakimUniversity of Brawijaya1
Widodo WidodoState University of Jakarta1
Ambariyanto AmbariyantoDiponegoro University1
Agustina L. N. AmininDiponegoro University1
Sutiman Bambang SumitroUniversity of Brawijaya1

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Sumber metadata: OAI-PMH (metadata jurnal) http://ejournal.undip.ac.id/index.php/ijms/oai, pertama di-harvest 8 Nov 2026, terakhir terlihat 8 Nov 2026.
Metadata asli (oai_dc)
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	<dc:title xml:lang="en-US">Morphological and Genetic Characteristics of Red Snapper (Lutjanidae)  in Nabire Waters</dc:title>
	<dc:creator>Maharani, Andi Nacisa Malfin Savina</dc:creator>
	<dc:creator>Sala, Ridwan</dc:creator>
	<dc:creator>Toha, Abdul Hamid A</dc:creator>
	<dc:creator>Purbani, Debora Christin</dc:creator>
	<dc:creator>Mokodongan, Daniel Frikli</dc:creator>
	<dc:creator>Kusuma, Aradea Bujana</dc:creator>
	<dc:creator>Pranata, Bayu</dc:creator>
	<dc:subject xml:lang="en-US">Papua; Lutjanus; Phylogenetic; CO1; mtDNA</dc:subject>
	<dc:description xml:lang="en-US">The Lutjanidae family has a wide range of varieties, posing challenges in their morphological identification. Molecular identification is crucial for augmenting the current morphological data as a comprehensive database for documenting the presence of economically significant fish species in Nabire water. This article provides a comprehensive analysis of the morphological and genetic characteristics of red snapper species, as well as assessment of the evolutionary connections among snapper fish found in the water. This study aims to analyze the morphological and genetic characteristics of red snapper species and assess the evolutionary relationships among red snapper found in the sea waters. The DNA extraction procedure was conducted according to the instructions provided by the Geneaid gSYNC DNA extraction kit. The molecular marker used is the DNA barcode of the cytochrome oxidase subunit I (CO1) gene. A total of 29 individuals were identified, representing 8 species, namely Lutjanus timoriensis, Lutjanus gibbus, Lutjanus bohar, Lutjanus papuensis, Pinjalo lewisi, Etelis coruscans, Pristipomoides multidens, and Aphareus rutilans. The molecular analysis indicated that there was a fragment length of 620 base pairs (bp). P. multidens and L.  gibbus had the greatest genetic distance (0.22), whilst the species L. bohar and L. gibbus had the smallest genetic distance (0.11). The phylogenetic tree reconstruction yielded 8 monophyletic clades. Based on morphological and genetic analysis, eight species of the Lutjanidae family were identified in Nabire waters. Research is needed on biological parameters such as size when first caught, optimum length of capture and size when first gonad mature.</dc:description>
	<dc:publisher xml:lang="en-US">Marine Science Department Diponegoro University</dc:publisher>
	<dc:date>2025-03-08</dc:date>
	<dc:type>info:eu-repo/semantics/article</dc:type>
	<dc:type>info:eu-repo/semantics/publishedVersion</dc:type>
	<dc:type xml:lang="en-US"></dc:type>
	<dc:format>application/pdf</dc:format>
	<dc:identifier>https://ejournal.undip.ac.id/index.php/ijms/article/view/67424</dc:identifier>
	<dc:identifier>10.14710/ik.ijms.30.1.83-91</dc:identifier>
	<dc:source xml:lang="en-US">ILMU KELAUTAN: Indonesian Journal of Marine Sciences; Vol 30, No 1 (2025): Ilmu Kelautan; 83-91</dc:source>
	<dc:source>2406-7598</dc:source>
	<dc:source>0853-7291</dc:source>
	<dc:language>eng</dc:language>
	<dc:relation>https://ejournal.undip.ac.id/index.php/ijms/article/view/67424/pdf</dc:relation>
	<dc:relation>https://ejournal.undip.ac.id/index.php/ijms/article/downloadSuppFile/67424/17864</dc:relation>
	<dc:rights xml:lang="en-US">Copyright (c) 2025 ILMU KELAUTAN: Indonesian Journal of Marine Sciences</dc:rights>
	<dc:rights xml:lang="en-US">https://creativecommons.org/licenses/by-sa/4.0</dc:rights>
</oai_dc:dc>