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Genetic Variation of Baram River Frog, Pulchrana baramica (Boettger, 1900), In Java, Sumatra, and Kalimantan based on 16S Mitochondrial Gene

Journal of Tropical Biodiversity and Biotechnology · Vol. 9 No. 4 (2024)

DOI
10.22146/jtbb.84814
ISSN
2540-9581, 2540-9573
Terbit
2024-11-08
Penerbit
Universitas Gadjah Mada
Bahasa
eng
Lisensi
creativecommons.org/licenses/by-sa/4.0

Abstrak

Baram River Frog (Pulchrana baramica) is a ranid species distributed in the Malay Peninsula, Borneo, Sumatra and represents the sole species from the genus Pulchrana on Java Island. Cryptic species are commonly encountered within the amphibian group which can cause confusion in the identification process. Due to the broad distribution range of P. baramica and the frequent occurrence of cryptic species within the amphibian group, it is important to evaluate the taxonomic status of P. baramica. Therefore, we investigated the taxonomic position of P. baramica from three populations (Kalimantan, Sumatra, and Java) and identified the interpopulation genetic variation based on molecular data of the 16S mitochondrial gene. We reconstructed phylogenetic relationships using Neighbour Joining, Maximum Likelihood, and Bayesian Inference. The research results revealed that Pulchrana baramica is a monophyletic group and nested within a group together with P. glandulosa and P. laterimaculata. The monophyletic group of P. baramica consisted of four distinct lineages that molecularly showed interspecific genetic variation. Clade 1 represents the population of Sumatra and Borneo (Kalimantan), clade 2 comprises the population from Borneo (Sarawak), clade 3 consists of population from Java, and clade 4 represents the population from Sumatra. Further research is required with the addition of morphological and acoustic data as supportive evidence to obtain more extensive comprehension of species identification.

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  • Universitas Gadjah Mada
  • Indonesian Institute of Sciences
  • University of Brawijaya
  • UIN Sunan Ampel Surabaya
  • National Research and Innovation Agency
  • The University of Texas at Arlington
  • Politeknik Bina Husada Kendari
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Rekan penulisOrganisasiArtikel bersama
Dwi Sendi PriyonoUniversitas Gadjah Mada6
Diana FebriyantiUniversitas Gadjah Mada4
Budi Setiadi DaryonoUniversitas Gadjah Mada3
Rury EprilurahmanUniversitas Gadjah Mada3
Febrina Amaliya Rha’ifaUniversitas Gadjah Mada3
Rosichon UbaidillahIndonesian Institute of Sciences3
Nia KurniawanUniversity of Brawijaya3
Zuliyati RohmahUniversitas Gadjah Mada2
Lukman HakimUniversitas Gadjah Mada2
Muhammad Alif FauziUniversity of Brawijaya2
Ahmad Nauval ArroyyanUIN Sunan Ampel Surabaya1
Saiful BahriUIN Sunan Ampel Surabaya1
Meilinda Rodhiya IdrusUIN Sunan Ampel Surabaya1
Karmilah KarmilahPoliteknik Bina Husada Kendari1
Anggun Diyan NurhasanahUniversitas Gadjah Mada1
Madyan Akmal HidayatUniversitas Gadjah Mada1
Muslifah HasanahUniversitas Gadjah Mada1
Ganies Riza AristyaUniversitas Gadjah Mada1
Adib Fakhruddin YusufUniversitas Gadjah Mada1
Adristi Shafa WidyasariUniversitas Gadjah Mada1
Niken Satuti Nur HandayaniUniversitas Gadjah Mada1
Ananto Puradi NainggolanUniversitas Gadjah Mada1
Vida Rahma LatifahUniversitas Gadjah Mada1
Vivi Indah NurcahyatiUniversitas Gadjah Mada1
Aldy Riau Wansyah HasibuanUniversitas Gadjah Mada1
Arini Dian PratiwiUniversitas Gadjah Mada1
Rindu AurantikaUniversitas Gadjah Mada1
Indra LesmanaUniversitas Gadjah Mada1
Fanni KhoirillahUniversitas Gadjah Mada1
Sri SulandariIndonesian Institute of Sciences1
MOCH SAMSUL ARIFIN ZEINIndonesian Institute of Sciences1
Evy Ayu AridaIndonesian Institute of Sciences1
Farid RifaieIndonesian Institute of Sciences1
Tri MaharaniUniversity of Brawijaya1

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Sumber metadata: OAI-PMH (metadata jurnal) https://jurnal.ugm.ac.id/jtbb/oai, pertama di-harvest 9 Nov 2026, terakhir terlihat 9 Nov 2026.
Metadata asli (oai_dc) 
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	<dc:title xml:lang="en-US">Genetic Variation of Baram River Frog, Pulchrana baramica (Boettger, 1900), In Java, Sumatra, and Kalimantan based on 16S Mitochondrial Gene</dc:title>
	<dc:creator>Fauzi, Luthfi</dc:creator>
	<dc:creator>Arisuryanti, Tuty</dc:creator>
	<dc:creator>Aji, Katon Waskito</dc:creator>
	<dc:creator>Riyanto, Awal</dc:creator>
	<dc:creator>Smith, Eric N.</dc:creator>
	<dc:creator>Hamidy, Amir</dc:creator>
	<dc:subject xml:lang="en-US"></dc:subject>
	<dc:subject xml:lang="en-US">Distinct lineages; Genetic variation; Pulchrana baramica; 16S rrna</dc:subject>
	<dc:description xml:lang="en-US">Baram River Frog (Pulchrana baramica) is a ranid species distributed in the Malay Peninsula, Borneo, Sumatra and represents the sole species from the genus Pulchrana on Java Island. Cryptic species are commonly encountered within the amphibian group which can cause confusion in the identification process. Due to the broad distribution range of P. baramica and the frequent occurrence of cryptic species within the amphibian group, it is important to evaluate the taxonomic status of P. baramica. Therefore, we investigated the taxonomic position of P. baramica from three populations (Kalimantan, Sumatra, and Java) and identified the interpopulation genetic variation based on molecular data of the 16S mitochondrial gene. We reconstructed phylogenetic relationships using Neighbour Joining, Maximum Likelihood, and Bayesian Inference. The research results revealed that Pulchrana baramica is a monophyletic group and nested within a group together with P. glandulosa and P. laterimaculata. The monophyletic group of P. baramica consisted of four distinct lineages that molecularly showed interspecific genetic variation. Clade 1 represents the population of Sumatra and Borneo (Kalimantan), clade 2 comprises the population from Borneo (Sarawak), clade 3 consists of population from Java, and clade 4 represents the population from Sumatra. Further research is required with the addition of morphological and acoustic data as supportive evidence to obtain more extensive comprehension of species identification.</dc:description>
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	<dc:date>2024-11-08</dc:date>
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	<dc:identifier>10.22146/jtbb.84814</dc:identifier>
	<dc:source xml:lang="en-US">Journal of Tropical Biodiversity and Biotechnology; Vol 9, No 4 (2024): December; jtbb84814</dc:source>
	<dc:source>2540-9581</dc:source>
	<dc:source>2540-9573</dc:source>
	<dc:language>eng</dc:language>
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	<dc:rights xml:lang="en-US">Copyright (c) 2024 Journal of Tropical Biodiversity and Biotechnology</dc:rights>
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