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Variation on DNA microsatellite of Holstein-Friesian dairy cows in Baturaden Dairy Cattle Breeding Center

Jurnal Ilmu Ternak dan Veteriner · Vol. 12 No. 2 (2012)

DOI
10.14334/jitv.v12i2.550
ISSN
2252-696X, 0853-7380
Terbit
2012-02-05
Penerbit
APPERTANI
Bahasa
eng
Lisensi
creativecommons.org/licenses/by/4.0

Abstrak

Eight microsatellite loci of which the locations were three on chromosome 6 (BTA6) namely CSN 3, BM 143 and BM 415; two on chromosome 9 (BTA9) namely ETH 225 and BM 4208; and three on chromosome 10 (BTA10) namely BP 31, BM 1237 and BM 888 were used to investigate genotypic variation of Holstein-Friesian (HF) dairy cows in Baturraden Dairy Cattle Breeding Centre. Research activities were carried out through some steps involving blood collection, DNA isolation, amplification on DNA fragments by polymerase chain reaction (PCR) and separation by electrophoresis with silver staining. Frequency and heterozygosity of genes under consideration were calculated. The results showed that the eight microsatellite loci exhibited a total number of 33 alleles. Locations of those alleles were five in BM 143 and BM 4208 loci; four in BM 415, CSN 3, ETH 225, BM 1237, BM 888 loci; and three in BP 31 locus. A number of 14 out of 33 alleles might be specific alleles for HF dairy cattle in Baturraden Dairy Cattle Breeding Centre. The lowest heterozygosity per locus (ĥ) was 0.6151 for BM 415 whilst the highest one was 0.7301 for BM 888. Additionally, the average heterozygosity for all loci (Ĥ) detected in this study was 0.6768. The genotype BB on locus BM 143 and AC on locus CSN-3 significantly affected (P0.05) the estimated breeding value of milk yield of HF cows in this location. Key Words: Holstein-Friesian Cows, DNA Microsatellite, Allele, EBV of Milk Yield

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  • IPB University
  • National Research and Innovation Agency
  • Padjadjaran University
  • Universitas Djuanda
  • Indonesian Agency for Agricultural Instruments Standardization
  • Tadulako University
  • Indonesian Institute of Sciences
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Rekan penulisOrganisasiArtikel bersama
Asep GunawanIPB University15
Ronny Rachman NoorIPB University11
Jakaria JakariaIPB University10
Eryk AndreasIPB University8
Sri MurtiniIPB University6
Anneke AnggraeniNational Research and Innovation Agency6
Isyana KhaerunnisaNational Research and Innovation Agency6
Ferdy SaputraNational Research and Innovation Agency6
Kasita ListyariniIPB University5
Niken UlupiIPB University5
Ismeth InounuIPB University5
Ratna Sholatia HarahapIPB University4
Dyah Perwitasari‐FarajallahIPB University4
Iman SupriatnaIPB University4
SubandriyoUniversitas Djuanda4
Eko HandiwirawanNational Research and Innovation Agency4
Andi Baso Lompengeng IshakIndonesian Agency for Agricultural Instruments Standardization4
Dedy Duryadi SolihinIPB University4
Bambang SuryobrotoIPB University3
Kanthi Arum WidayatiIPB University3
Arief BoedionoIPB University3
Irma Isnafia AriefIPB University3
Yusli WardiatnoIPB University3
Raden Iis ArifiantiniIPB University3
Dewi Apri AstutiIPB University2
Sri DarwatiIPB University2
Siti Darodjah RasadPadjadjaran University2
Nena HilmiaPadjadjaran University2
Annawaty AnnawatyTadulako University2
Daisy WoworIndonesian Institute of Sciences2
Noer Muhammad Dliyaul HaqIPB University2
Diah Nugrahani PristihadiIPB University2
Cahyo BudimanIPB University2
Muladno MuladnoIPB University2
Maria UlfahIPB University2
Bambang PurwantaraIPB University2

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Sumber metadata: OAI-PMH (metadata jurnal) https://medpub.appertani.org/index.php/jitv/oai, pertama di-harvest 9 Nov 2026, terakhir terlihat 9 Nov 2026.
Metadata asli (oai_dc) 
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	<dc:title xml:lang="en-US">Variation on DNA microsatellite of Holstein-Friesian dairy cows in Baturaden Dairy Cattle Breeding Center</dc:title>
	<dc:creator>Sumantri, C</dc:creator>
	<dc:creator>Anggraeni, A</dc:creator>
	<dc:creator>Farajallah, A</dc:creator>
	<dc:creator>Perwitasari, D</dc:creator>
	<dc:description xml:lang="en-US">Eight microsatellite loci of which the locations were three on chromosome 6 (BTA6) namely CSN 3, BM 143 and BM 415; two on chromosome 9 (BTA9) namely ETH 225 and BM 4208; and three on chromosome 10 (BTA10) namely BP 31, BM 1237 and BM 888 were used to investigate genotypic variation of Holstein-Friesian (HF) dairy cows in Baturraden Dairy Cattle Breeding Centre. Research activities were carried out through some steps involving blood collection, DNA isolation, amplification on DNA fragments by polymerase chain reaction (PCR) and separation by electrophoresis with silver staining. Frequency and heterozygosity of genes under consideration were calculated. The results showed that the eight microsatellite loci exhibited a total number of 33 alleles. Locations of those alleles were five in BM 143 and BM 4208 loci; four in BM 415, CSN 3, ETH 225, BM 1237, BM 888 loci; and three in BP 31 locus. A number of 14 out of 33 alleles might be specific alleles for HF dairy cattle in Baturraden Dairy Cattle Breeding Centre. The lowest heterozygosity per locus (ĥ) was 0.6151 for BM 415 whilst the highest one was 0.7301 for BM 888. Additionally, the average heterozygosity for all loci (Ĥ) detected in this study was 0.6768. The genotype BB on locus BM 143 and AC on locus CSN-3 significantly affected (P0.05) the estimated breeding value of milk yield of HF cows in this location. Key Words: Holstein-Friesian Cows, DNA Microsatellite, Allele, EBV of Milk Yield</dc:description>
	<dc:publisher xml:lang="en-US">APPERTANI</dc:publisher>
	<dc:date>2012-02-05</dc:date>
	<dc:type>info:eu-repo/semantics/article</dc:type>
	<dc:type>info:eu-repo/semantics/publishedVersion</dc:type>
	<dc:type xml:lang="en-US">Peer-reviewed Article</dc:type>
	<dc:format>application/pdf</dc:format>
	<dc:identifier>https://medpub.appertani.org/index.php/jitv/article/view/550</dc:identifier>
	<dc:identifier>10.14334/jitv.v12i2.550</dc:identifier>
	<dc:source xml:lang="en-US">Jurnal Ilmu Ternak dan Veteriner; Vol 12, No 2 (2007): JUNE 2007; p.124-133</dc:source>
	<dc:source>2252-696X</dc:source>
	<dc:source>0853-7380</dc:source>
	<dc:language>eng</dc:language>
	<dc:relation>https://medpub.appertani.org/index.php/jitv/article/view/550/559</dc:relation>
	<dc:rights xml:lang="en-US">Copyright (c) 1970 Indonesian Journal of Animal and Veterinary Sciences</dc:rights>
	<dc:rights xml:lang="en-US">http://creativecommons.org/licenses/by/4.0</dc:rights>
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