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EVALUATING THE DIVERSITY AND ABUNDANCE OF MARINE FISH IN THE MAKASSAR STRAIT, INDONESIA THROUGH ENVIRONMENTAL DNA (EDNA) ANALYSIS

Jurnal Ilmu Kelautan SPERMONDE · Vol. UME (2024) · pp. 40–52

DOI
10.20956/jiks.v10i2.32405
ISSN
2614-5049, 2460-0156
Published
2024-08-05
Publisher
Hasanuddin University
Language
en
License
creativecommons.org/licenses/by-nc/4.0

Abstract

The recent adoption of environmental DNA (eDNA) represents an innovative method for assessing the presence of aquatic vertebrate species, providing a relatively straightforward approach with significant implications for conservation biology. In our investigation, we employed eDNA metabarcoding to explore the diversity of fish in the Makassar Strait. We collected eDNA from samples taken both at the surface and from the water column (15 m depth) at two specific locations within this region. The reliability of the MiFish-U primer set methodology in estimating fish diversity in the Makassar Strait was assessed. In a single survey, based on four water samples from the Makassar Strait, we successfully identified 11 marine fish taxa at the species level. These taxa belong to 8 families across 8 orders. The predominance of reef-dwelling species suggests that coral reefs play a dominant role as the primary ecosystem in this area. Among the surveyed sites, Barru Waters exhibited the highest species richness (7 species), while Pangkep Waters only revealed 4 species. Through the application of eDNA metabarcoding, this study provided a means to assess fish diversity, delivering crucial foundational information. Our findings highlight the cost-effectiveness of the eDNA metabarcoding method as a powerful scientific tool for the management and conservation of marine fish resources in the Makassar Strait.

Keywords

Collaboration network of the authors

40 authors · 207 co-authorship links · showing the 40 most connected

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  • Institut Agama Islam Negeri Kendari
  • Affiliation unknown
  • Different organisations
  • Same organisation
  • Affiliation unknown
  • Thicker line = more joint articles · bigger circle = more articles
Show as table
Co-authorOrganisationJoint articles
Budiman YunusAffiliation unknown3
Edison SaadeAffiliation unknown2
Marlina AchmadAffiliation unknown2
Yushinta FujayaAffiliation unknown2
Suharto SuhartoAffiliation unknown2
Khusnul YaqinAffiliation unknown2
Dewi YanuaritaAffiliation unknown2
Wilma Joanna Carolina MokaAffiliation unknown2
Moh. Tauhid UmarAffiliation unknown2
Suwarni SuwarniAffiliation unknown2
Angelinus VincentiusAffiliation unknown1
Rustam RustamAffiliation unknown1
Zainuddin ZainuddinInstitut Agama Islam Negeri Kendari1
Badraeni BadraeniAffiliation unknown1
Besse Tenri NurkamilahAffiliation unknown1
Dody Dh. TrijunoAffiliation unknown1
Elmi N. ZainuddinAffiliation unknown1
Gunarto LatamaAffiliation unknown1
Hasni Y. AzisAffiliation unknown1
Irfan AmbasAffiliation unknown1
M. Iqbal DjawadAffiliation unknown1
Muh. Yusri KarimAffiliation unknown1
Siti AslamyahAffiliation unknown1
Nur Umriani PermatasariAffiliation unknown1
Djabal Nur BasirAffiliation unknown1
Yusran Nur IndarAffiliation unknown1
Farida SitepuAffiliation unknown1
Basse Siang ParawansaAffiliation unknown1
Irmawati IrmawatiAffiliation unknown1
Dwi Fajriyati InakuAffiliation unknown1
Nadiarti NurdinAffiliation unknown1
Irmawati IrmawatiAffiliation unknown1
Jamaluddin JompaAffiliation unknown1
Alinda N HasanahAffiliation unknown1

Affiliations come from OpenAlex; journal OAI-PMH metadata carries none. Authors without an OpenAlex ID are matched by name, which can merge or split people.

Metadata source: OAI-PMH (metadata jurnal) https://journal.unhas.ac.id/index.php/jiks/oai, first harvested 4 Nov 2026, last seen 4 Nov 2026.
Original metadata (oai_dc)
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	<dc:title xml:lang="en">EVALUATING THE DIVERSITY AND ABUNDANCE OF MARINE FISH IN THE MAKASSAR STRAIT, INDONESIA THROUGH ENVIRONMENTAL DNA (EDNA) ANALYSIS</dc:title>
	<dc:creator xml:lang="en">Rukminasari, Nita</dc:creator>
	<dc:creator xml:lang="en">Hidayani, Andi Aliah</dc:creator>
	<dc:creator xml:lang="en">Moka, Wilma J.C.</dc:creator>
	<dc:creator xml:lang="en">Arbit, Nur Indah Sari</dc:creator>
	<dc:creator xml:lang="en">Andriyono, Sapto</dc:creator>
	<dc:creator xml:lang="en">Parenrengi, Andi</dc:creator>
	<dc:subject xml:lang="en">Environmental DNA, marine fish species, metabarcoding, Makassar Strait</dc:subject>
	<dc:description xml:lang="en">The recent adoption of environmental DNA (eDNA) represents an innovative method for assessing the presence of aquatic vertebrate species, providing a relatively straightforward approach with significant implications for conservation biology. In our investigation, we employed eDNA metabarcoding to explore the diversity of fish in the Makassar Strait. We collected eDNA from samples taken both at the surface and from the water column (15 m depth) at two specific locations within this region. The reliability of the MiFish-U primer set methodology in estimating fish diversity in the Makassar Strait was assessed. In a single survey, based on four water samples from the Makassar Strait, we successfully identified 11 marine fish taxa at the species level. These taxa belong to 8 families across 8 orders. The predominance of reef-dwelling species suggests that coral reefs play a dominant role as the primary ecosystem in this area. Among the surveyed sites, Barru Waters exhibited the highest species richness (7 species), while Pangkep Waters only revealed 4 species. Through the application of eDNA metabarcoding, this study provided a means to assess fish diversity, delivering crucial foundational information. Our findings highlight the cost-effectiveness of the eDNA metabarcoding method as a powerful scientific tool for the management and conservation of marine fish resources in the Makassar Strait.
 
 </dc:description>
	<dc:publisher xml:lang="en">Hasanuddin University</dc:publisher>
	<dc:date>2024-08-05</dc:date>
	<dc:type>info:eu-repo/semantics/article</dc:type>
	<dc:type>info:eu-repo/semantics/publishedVersion</dc:type>
	<dc:format>application/pdf</dc:format>
	<dc:identifier>https://journal.unhas.ac.id/index.php/jiks/article/view/32405</dc:identifier>
	<dc:identifier>10.20956/jiks.v10i2.32405</dc:identifier>
	<dc:source xml:lang="en">Jurnal Ilmu Kelautan SPERMONDE; VOLUME 10 NUMBER 2, 2024; 40-52</dc:source>
	<dc:source>2614-5049</dc:source>
	<dc:source>2460-0156</dc:source>
	<dc:source>10.20956/jiks.v10i2</dc:source>
	<dc:language>en</dc:language>
	<dc:relation>https://journal.unhas.ac.id/index.php/jiks/article/view/32405/11806</dc:relation>
	<dc:rights xml:lang="en">http://creativecommons.org/licenses/by-nc/4.0</dc:rights>
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