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Intrapopulated Genetic Variation Of The Blue Swimming Crab (Portunus Pelagicus) From Kaimana, West Papua Indonesia Based On Cytochrome C Oxidase Subunit I (Co1) Gene Sequence

Torani Journal of Fisheries and Marine Science · Vol. UME No. MOR (2020) · pp. 71–83

DOI
10.35911/torani.v3i2.11373
ISSN
2615-6601, 2621-5322
Published
2020-09-28
Publisher
Hasanuddin University
Language
en

Abstract

The first step to establishing appropriate broodstock management and conservation programs and to avoid decreasing genetic variability in this selective breeding program is the development of molecular genetic markers that can be used for evaluation of genetic stock determinations in gene flow rates. However, morphologically it is rather difficult to distinguish between one individual and another. The purpose of this study was to analyze genetic variation to prove differences in intrapopulated crabs. Small crab samples were collected from the district. Kaimana, West Papua. Morphological analysis was carried out by looking at differences in the color and pattern of white spots between one individual and another. The isolation of the crab CO1 gene was carried out by analyzing each individual after grouping it based on morphology. The results of the morphological analysis showed that males had seven color patterns and white carapace patterns while females had five color patterns and white spots on the carapace. However, there is little difference between morphology and genetics, especially in females, where the female is genetically divided into only two major groups. This indicates that there is information on phylogenetic relationships between individuals. The white spot on the carapace is genetically influenced so that it can be used to identify species or varieties, while the carapace color has not been shown to be influenced by the CO1 gene.

Keywords

Collaboration network of the authors

40 authors · 179 co-authorship links · 6 across different organisations · showing the 40 most connected

Hover or tap a name to highlight its co-authors. Double-click to open the author's page.

  • Universitas Sulawesi Tenggara
  • Universitas Halu Oleo
  • Institut Agama Islam Negeri Kendari
  • Indonesia University of Education
  • Affiliation unknown
  • Different organisations
  • Same organisation
  • Affiliation unknown
  • Thicker line = more joint articles · bigger circle = more articles
Show as table
Co-authorOrganisationJoint articles
Zainuddin ZainuddinInstitut Agama Islam Negeri Kendari3
Andi Aliah HidayaniAffiliation unknown3
Edison SaadeAffiliation unknown3
Marlina AchmadAffiliation unknown3
Sri KhayatiUniversitas Sulawesi Tenggara2
Haryati HaryatiInstitut Agama Islam Negeri Kendari2
Rustam RustamAffiliation unknown2
Badraeni BadraeniAffiliation unknown2
Besse Tenri NurkamilahAffiliation unknown2
Elmi N. ZainuddinAffiliation unknown2
Gunarto LatamaAffiliation unknown2
Hasni Y. AzisAffiliation unknown2
Irfan AmbasAffiliation unknown2
M. Iqbal DjawadAffiliation unknown2
Muh. Yusri KarimAffiliation unknown2
Siti AslamyahAffiliation unknown2
Djohar ArifinUniversitas Sulawesi Tenggara1
Sri MulyaniIndonesia University of Education1
Rifkah Anniza RahmanUniversitas Sulawesi Tenggara1
Dewi AnggrainiAffiliation unknown1
Sulsalman MoitaUniversitas Halu Oleo1
Ayu Lestari DewiUniversitas Sulawesi Tenggara1
Muh. TahirUniversitas Halu Oleo1
M YusufUniversitas Sulawesi Tenggara1
La NiasaUniversitas Sulawesi Tenggara1
Hijriani HijrianiUniversitas Sulawesi Tenggara1
Supriadi SupriadiAffiliation unknown1
Muhammad ArsyadUniversitas Halu Oleo1
Jamaluddin HosUniversitas Halu Oleo1
Benedick Pradipta Diorent Barung BarungAffiliation unknown1
Arnianti ArniantiAffiliation unknown1
Nurleni NurleniAffiliation unknown1
Andi KusumawatiAffiliation unknown1
Andi Tenri Gading Nurul AzizahAffiliation unknown1
Alfina Asha Putri RamadhaniAffiliation unknown1
Muhammad Irdam FerdiansahAffiliation unknown1

Affiliations come from OpenAlex; journal OAI-PMH metadata carries none. Authors without an OpenAlex ID are matched by name, which can merge or split people.

Metadata source: OAI-PMH (metadata jurnal) https://journal.unhas.ac.id/index.php/torani/oai, first harvested 5 Nov 2026, last seen 5 Nov 2026.
Original metadata (oai_dc)
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	<dc:title xml:lang="en">Intrapopulated Genetic Variation Of The Blue Swimming Crab (Portunus Pelagicus) From Kaimana, West Papua Indonesia Based On Cytochrome C Oxidase Subunit I (Co1) Gene Sequence</dc:title>
	<dc:creator xml:lang="en">Hidayani, A. Aliah</dc:creator>
	<dc:creator xml:lang="en">Fujaya, Yushinta </dc:creator>
	<dc:creator xml:lang="en">Trijuno, Dody Dh. </dc:creator>
	<dc:creator xml:lang="en">Alimuddin, Alimuddin</dc:creator>
	<dc:subject xml:lang="en">blue swimming crab</dc:subject>
	<dc:subject xml:lang="en">Portunus pelagicus</dc:subject>
	<dc:subject xml:lang="en">CO1</dc:subject>
	<dc:subject xml:lang="en">Kaimana</dc:subject>
	<dc:description xml:lang="en">The first step to establishing appropriate broodstock management and conservation programs and to avoid decreasing genetic variability in this selective breeding program is the development of molecular genetic markers that can be used for evaluation of genetic stock determinations in gene flow rates. However, morphologically it is rather difficult to distinguish between one individual and another. The purpose of this study was to analyze genetic variation to prove differences in intrapopulated crabs. Small crab samples were collected from the district. Kaimana, West Papua. Morphological analysis was carried out by looking at differences in the color and pattern of white spots between one individual and another. The isolation of the crab CO1 gene was carried out by analyzing each individual after grouping it based on morphology. The results of the morphological analysis showed that males had seven color patterns and white carapace patterns while females had five color patterns and white spots on the carapace. However, there is little difference between morphology and genetics, especially in females, where the female is genetically divided into only two major groups. This indicates that there is information on phylogenetic relationships between individuals. The white spot on the carapace is genetically influenced so that it can be used to identify species or varieties, while the carapace color has not been shown to be influenced by the CO1 gene.</dc:description>
	<dc:publisher xml:lang="en">Hasanuddin University</dc:publisher>
	<dc:date>2020-09-28</dc:date>
	<dc:type>info:eu-repo/semantics/article</dc:type>
	<dc:type>info:eu-repo/semantics/publishedVersion</dc:type>
	<dc:format>application/pdf</dc:format>
	<dc:identifier>https://journal.unhas.ac.id/index.php/torani/article/view/11373</dc:identifier>
	<dc:identifier>10.35911/torani.v3i2.11373</dc:identifier>
	<dc:source xml:lang="en">Torani Journal of Fisheries and Marine Science; VOLUME 3 NOMOR 2, JUNI 2020; 71-83</dc:source>
	<dc:source>2615-6601</dc:source>
	<dc:source>2621-5322</dc:source>
	<dc:source>10.35911/torani.v3i2</dc:source>
	<dc:language>en</dc:language>
	<dc:relation>https://journal.unhas.ac.id/index.php/torani/article/view/11373/5873</dc:relation>
	<dc:rights xml:lang="en">Copyright (c) 2025 Torani Journal of Fisheries and Marine Science</dc:rights>
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