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k-Means Clustering to Enhance the Petrified Wood Composition Data Analyses and Its Interpretation

Indonesian Journal of Applied Mathematics · Vol. 3 No. 1 (2023)

DOI
10.35472/indojam.v3i1.1288
ISSN
2774-2016, 2774-2067
Terbit
2023-07-30
Penerbit
Institut Teknologi Sumatra

Abstrak

Geologically, the fossilization of wood materials into fossils requires appropriate conditions, some of which have been preserved for millions of years. In nature, the organic mass of wood must be quickly replaced by inorganic elements before it decomposes under harsh geological conditions. Anorganic oxides such as silica-oxide, are known to be the main components of most wood specimens (up to 80%). The presence of alkaline oxides such as sodium and potassium oxide seems to play a major role in the presence of dissolved silica during petrification. However, their significance in the petrification phenomenon that occurs in fossilized plant wood is not yet known. Therefore, in this study, cluster analysis was conducted to determine the relationship between the presence of silica and alkaline compounds in petrified wood fossils. The approach used was -means clustering supported by the Elbow Method, which aims to review and order a complex set of data into subsets, thus allowing interpretation. The results showed that the clustering of the fossil wood composition data was optimal at = 3. There is a fair correlation between the presence of silica and alkali oxide compounds (-0.504 to -0.387), as well as with another inorganic compounds (+0.957). The presence of sodium and potassium is strongly correlated during silicification (+0.905). Additionally, the results of data clustering made the wood fossilization process susceptible to describe, especially through data regression. The data visualization provides more facts and proper explanations of the role of alkaline oxides in wood silicification. This study furthers our understanding of wood fossilization, especially the diagenesis of wood chemical composition in geological history.

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Fuji LestariAfiliasi tidak diketahui2
Mika Alvionita SAfiliasi tidak diketahui2
Ardika SatriaAfiliasi tidak diketahui2
Dewi SuhikaBandung Institute of Technology1
Sri Efrinita IrwanAfiliasi tidak diketahui1
Edi CahyonoUniversitas Halu Oleo1
. KartonoAfiliasi tidak diketahui1
Happy Christin NataliaAfiliasi tidak diketahui1
Rinaldi IkhramAfiliasi tidak diketahui1
Nabila Nurita PutriAfiliasi tidak diketahui1
Muhammad Ammar AlkautsarAfiliasi tidak diketahui1
Sekar Anisa SelyAfiliasi tidak diketahui1
Della Najunda K.SAfiliasi tidak diketahui1
Rofi Ilmi FadhillahAfiliasi tidak diketahui1
Alfredo Edward LazuardiAfiliasi tidak diketahui1
Meysi SupmawatiAfiliasi tidak diketahui1
Eli RahmawatiAfiliasi tidak diketahui1
Naila Tsamrotul AulaAfiliasi tidak diketahui1
Desi WulandariAfiliasi tidak diketahui1
Angela Putri LarasatiAfiliasi tidak diketahui1
Robecca Miranda Agustina GultomAfiliasi tidak diketahui1
Setia Hot Dameria PurbaAfiliasi tidak diketahui1
Suci Ayu PangestutiAfiliasi tidak diketahui1
Gusrian PutraAfiliasi tidak diketahui1
Lutfi MardiantoAfiliasi tidak diketahui1
Ikhwan FauziAfiliasi tidak diketahui1
Sefta Mila RianiAfiliasi tidak diketahui1

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Sumber metadata: Crossref API (cadangan, berdasarkan ISSN) https://api.crossref.org/journals/2774-2016/works, pertama di-harvest 5 Nov 2026, terakhir terlihat 8 Nov 2026.
Metadata sebagai oai_dc, dikonversi dari Crossref
<oai_dc:dc xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/"><dc:title>k-Means Clustering to Enhance the Petrified Wood Composition Data Analyses and Its Interpretation</dc:title><dc:creator>Muliawati, Triyana</dc:creator><dc:creator>Harbowo, Danni Gathot</dc:creator><dc:creator>Lubis, Andre Markus Fernando</dc:creator><dc:creator>Turnip, Juan Daniel</dc:creator><dc:creator>Irda, Erina Rosalia</dc:creator><dc:creator>Azahra, Adelia</dc:creator><dc:creator>Marito, Yanti</dc:creator><dc:description>&lt;jats:p&gt;Geologically, the fossilization of wood materials into fossils requires appropriate conditions, some of which have been preserved for millions of years. In nature, the organic mass of wood must be quickly replaced by inorganic elements before it decomposes under harsh geological conditions. Anorganic oxides such as silica-oxide, are known to be the main components of most wood specimens (up to 80%). The presence of alkaline oxides such as sodium and potassium oxide seems to play a major role in the presence of dissolved silica during petrification. However, their significance in the petrification phenomenon that occurs in fossilized plant wood is not yet known. Therefore, in this study, cluster analysis was conducted to determine the relationship between the presence of silica and alkaline compounds in petrified wood fossils. The approach used was -means clustering supported by the Elbow Method, which aims to review and order a complex set of data into subsets, thus allowing interpretation. The results showed that the clustering of the fossil wood composition data was optimal at  = 3. There is a fair correlation between the presence of silica and alkali oxide compounds (-0.504 to -0.387), as well as with another inorganic compounds (+0.957). The presence of sodium and potassium is strongly correlated during silicification (+0.905). Additionally, the results of data clustering made the wood fossilization process susceptible to describe, especially through data regression. The data visualization provides more facts and proper explanations of the role of alkaline oxides in wood silicification. This study furthers our understanding of wood fossilization, especially the diagenesis of wood chemical composition in geological history.&lt;/jats:p&gt;</dc:description><dc:publisher>Institut Teknologi Sumatra</dc:publisher><dc:date>2023-07-30</dc:date><dc:type>info:eu-repo/semantics/article</dc:type><dc:format>application/pdf</dc:format><dc:identifier>https://doi.org/10.35472/indojam.v3i1.1288</dc:identifier><dc:identifier>10.35472/indojam.v3i1.1288</dc:identifier><dc:source>Indonesian Journal of Applied Mathematics; Vol 3 No 1 (2023); 26</dc:source><dc:source>2774-2016</dc:source><dc:source>2774-2067</dc:source><dc:relation>https://journal.itera.ac.id/index.php/indojam/article/download/1288/424</dc:relation></oai_dc:dc>