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Variance-k-means++: A deterministic centroid initialization method based on variance for enhanced clustering stability

International Journal of Electrical and Computer Engineering (IJECE) · Vol. 16 No. 3 (2026)

DOI
10.11591/ijece.v16i3.pp1434-1448
ISSN
2722-2578, 2088-8708
Published
2026-06-01
Publisher
Institute of Advanced Engineering and Science
License
creativecommons.org/licenses/by-sa/4.0

Abstract

K-means++ is developed to improve the performance of k-means when choosing a starting centroid. However, both algorithms in clustering still select an initial centroid randomly. Randomly selecting initial centroids has the potential to produce unstable clusters. This paper proposes a deterministic centroid initialization method called variance-k-means++, which utilizes statistical properties—mean and variance—to generate pseudo-centroids and derive initial centroids. The method aims to improve clustering stability and reduce the number of iterations. For the initial study, we used low-dimensional data to conduct the experiment series. Then, we employed two baseline methods for benchmarking, k-means and k-means++. The results show that variance-k-means++ outperformed the baseline method on average. Evaluating in Davies-Bouldin Index (DBI) and convergence analysis, we obtained DBI values at 0.756 and 0,771 for vertical and horizontal variance k-means++ with Iris dataset. At the same time, baseline methods have 0.802 and 0.830 for k-means++ and k-means, respectively. In convergence analysis, the results are 5.158 for vertical and 5.474 for horizontal, while baseline methods are 9.000 and 8.842. The primary contribution of this study lies in its achievement of minimizing the number of iterations while enhancing cluster stability.

Collaboration network of the authors

40 authors · 100 co-authorship links · 11 across different organisations · showing the 40 most connected

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  • State University of Jakarta
  • IPB University
  • Universitas Halu Oleo
  • State University of Semarang
  • Affiliation unknown
  • Different organisations
  • Same organisation
  • Affiliation unknown
  • Thicker line = more joint articles · bigger circle = more articles
Show as table
Co-authorOrganisationJoint articles
Wadiyo WadiyoAffiliation unknown4
Udi UtomoAffiliation unknown4
Slamet HaryonoAffiliation unknown3
Yatim RiyantoAffiliation unknown2
Malarsih MalarsihAffiliation unknown2
Mujimin MujiminAffiliation unknown2
Asmar HasanUniversitas Halu Oleo1
Kikin Hamzah MutaqinIPB University1
Muhammad TaufikUniversitas Halu Oleo1
Sri Hendrastuti HidayatIPB University1
NurfaidaAffiliation unknown1
Dino RimanthoAffiliation unknown1
Alma Dita Mia NarfaisAffiliation unknown1
Gunarti Dwi LestariAffiliation unknown1
Wiwin YulianingsihAffiliation unknown1
Mega WulandariAffiliation unknown1
Rahina NugrahaniState University of Semarang1
Eko HaryantoAffiliation unknown1
Johan SutarjoAffiliation unknown1
Fitri aji Nury astutiAffiliation unknown1
Eko SugiartoAffiliation unknown1
Achmad ZairinAffiliation unknown1
I wayan agus suardiana putraAffiliation unknown1
Agus CahyonoAffiliation unknown1
Ronald CandraAffiliation unknown1
Widia EffendiAffiliation unknown1
Meisera Fika LathifasariAffiliation unknown1
Raafinsha RahmaniarAffiliation unknown1
Sunarto SunartoAffiliation unknown1
Sostenes Mono TandililingAffiliation unknown1
Suharto SuhartoAffiliation unknown1
Yustin Rati AnugerahAffiliation unknown1
Puspa YuniAffiliation unknown1
Treyanus HomklomAffiliation unknown1

Affiliations come from OpenAlex; journal OAI-PMH metadata carries none. Authors without an OpenAlex ID are matched by name, which can merge or split people.

This record comes from Crossref (what the publisher deposited), because the journal's own OAI-PMH endpoint could not be harvested.

Metadata source: Crossref API (cadangan, berdasarkan ISSN) https://api.crossref.org/journals/2088-8708/works, first harvested 27 Oct 2026, last seen 1 Nov 2026.
Metadata as oai_dc, converted from Crossref
<oai_dc:dc xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/"><dc:title>Variance-k-means++: A deterministic centroid initialization method based on variance for enhanced clustering stability</dc:title><dc:creator>Widodo, Widodo</dc:creator><dc:creator>Ramadhan, Jiel Vayyad</dc:creator><dc:creator>Duskarnaen, Muhammad Ficky</dc:creator><dc:creator>Fauziastuti, Via Tuhamah</dc:creator><dc:creator>Pondayu, Chelsea Zaomi</dc:creator><dc:creator>Septianda, Mada Rekadarma</dc:creator><dc:description>&lt;jats:p&gt;K-means++ is developed to improve the performance of k-means when choosing a starting centroid. However, both algorithms in clustering still select an initial centroid randomly. Randomly selecting initial centroids has the potential to produce unstable clusters. This paper proposes a deterministic centroid initialization method called variance-k-means++, which utilizes statistical properties—mean and variance—to generate pseudo-centroids and derive initial centroids. The method aims to improve clustering stability and reduce the number of iterations. For the initial study, we used low-dimensional data to conduct the experiment series. Then, we employed two baseline methods for benchmarking, k-means and k-means++. The results show that variance-k-means++ outperformed the baseline method on average. Evaluating in Davies-Bouldin Index (DBI) and convergence analysis, we obtained DBI values at 0.756 and 0,771 for vertical and horizontal variance k-means++ with Iris dataset. At the same time, baseline methods have 0.802 and 0.830 for k-means++ and k-means, respectively. In convergence analysis, the results are 5.158 for vertical and 5.474 for horizontal, while baseline methods are 9.000 and 8.842. The primary contribution of this study lies in its achievement of minimizing the number of iterations while enhancing cluster stability.&lt;/jats:p&gt;</dc:description><dc:publisher>Institute of Advanced Engineering and Science</dc:publisher><dc:date>2026-06-01</dc:date><dc:type>info:eu-repo/semantics/article</dc:type><dc:format>application/pdf</dc:format><dc:identifier>https://doi.org/10.11591/ijece.v16i3.pp1434-1448</dc:identifier><dc:identifier>10.11591/ijece.v16i3.pp1434-1448</dc:identifier><dc:source>International Journal of Electrical and Computer Engineering (IJECE); Vol 16 No 3 (2026); 1434</dc:source><dc:source>2722-2578</dc:source><dc:source>2088-8708</dc:source><dc:relation>https://ijece.iaescore.com/index.php/IJECE/article/viewFile/41162/18763</dc:relation><dc:rights>http://creativecommons.org/licenses/by-sa/4.0</dc:rights></oai_dc:dc>