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Association of SNP g.232 GT Calpain Gene with Growth and Live Meat Quality Prediction using Ultrasound Images in Bali Cattle

Jurnal Ilmu Ternak dan Veteriner · Vol. 26 No. 2 (2021) · pp. 49–56

DOI
10.14334/jitv.v26i2.2701
ISSN
2252-696X, 0853-7380
Published
2021-06-29
Publisher
APPERTANI
Language
eng

Abstract

Bali cattle (Bos javanicus) are native Indonesian cattle, domesticated from banteng (Bibos banteng). Genes that have an important role in meat quality are calcium-activated neutral protease genes, known as calpains (CAPN). The objective of this study was to evaluate the polymophisms of calpain gene SNP g.232 GT by PCR-RFLP technique and its influence on growth trait and meat quality of Bali cattle detected by ultrasound imaging of longissimus dorsi thickness (LDT), back fat thickness (BFT), marbling score (MS), and intramuscular fat percentage (PIMF). The polymorphisms of CAPN1 gene were analyzed by PCR-RFLP using BglII restriction enzyme (n=52 cattle). The ultrasound images of longissimus dorsi muscle were carried out transversally and longitudinal between 12th -13th thoracic vertebrae then analyzed by Image-J NIH software. Result showed that SNP g.232 GT of CAPN1 gene was polymorphic in Bali cattle. SNP g.232 GT of CAPN1 gene in Bali cattle has higher diversity which was showed of 0.48 heterozygosity value and was in Hardy-Weinberg equilibrium. The polymorphisms of SNP g.232 GT was associated significantly (P0.05) with bodyweight at 730 days, marbling score (MS), and intramuscular fat percentage (PIMF). It suggests that the CAPN1 gene in Bali cattle is a candidate for Marker Assisted Selection (MAS), which influences body weight at 730 days, marbling score, and percentage of intramuscular fat.

Keywords

Collaboration network of the authors

40 authors · 116 co-authorship links · 7 across different organisations · showing the 40 most connected

Hover or tap a name to highlight its co-authors. Double-click to open the author's page.

  • IPB University
  • Hasanuddin University
  • Diponegoro University
  • Affiliation unknown
  • Different organisations
  • Same organisation
  • Affiliation unknown
  • Thicker line = more joint articles · bigger circle = more articles
Show as table
Co-authorOrganisationJoint articles
Ronny Rachman NoorAffiliation unknown9
Asep GunawanIPB University8
Rudy PriyantoIPB University6
Anneke AnggraeniAffiliation unknown5
Ratna Sholatia HarahapIPB University4
C. SumantriAffiliation unknown4
Kasita ListyariniIPB University4
Isyana KhaerunnisaAffiliation unknown4
Sri MurtiniIPB University3
Nena HilmiaAffiliation unknown3
Irma Isnafia AriefAffiliation unknown3
R. PriyantoAffiliation unknown3
A. GunawanAffiliation unknown3
Niken UlupiIPB University2
I KhaerunnisaAffiliation unknown2
E AndreasAffiliation unknown2
SubandriyoAffiliation unknown2
Eko HandiwirawanAffiliation unknown2
K. ListyariniAffiliation unknown2
Fuadi ZulkipliIPB University2
Edwar EdwarAffiliation unknown2
Sutikno SutiknoDiponegoro University2
Mutasem Ali M. AbuzahraAffiliation unknown2
A AnggraeniAffiliation unknown2
Salman YusufAffiliation unknown1
Sri RahayuHasanuddin University1
Adinda Wanda AstiraAffiliation unknown1
Melly Pratiwi SetyawatiIPB University1
Dewi Apri AstutiIPB University1
Elmy MarianaIPB University1
Achmad Gitaraka ArchimilarIPB University1
Sri DarwatiAffiliation unknown1
Veni RVSIPB University1
B PurwantaraAffiliation unknown1
D D SolihinAffiliation unknown1

Affiliations come from OpenAlex; journal OAI-PMH metadata carries none. Authors without an OpenAlex ID are matched by name, which can merge or split people.

Metadata source: OAI-PMH (metadata jurnal) https://medpub.appertani.org/index.php/jitv/oai, first harvested 9 Nov 2026, last seen 9 Nov 2026.
Original metadata (oai_dc) 
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	<dc:title xml:lang="en-US">Association of SNP g.232 GT Calpain Gene with Growth and Live Meat Quality Prediction using Ultrasound Images in Bali Cattle</dc:title>
	<dc:creator>Dairoh, Dairoh</dc:creator>
	<dc:creator>Jakaria, Jakaria</dc:creator>
	<dc:creator>Ulum, Mokhamad Fakhrul</dc:creator>
	<dc:creator>Ishak, Andi Baso Lompengeng</dc:creator>
	<dc:creator>Sumantri, Cece</dc:creator>
	<dc:subject xml:lang="en-US">Bali cattle, Calpain gene, Growth, Meat quality, Ultrasound</dc:subject>
	<dc:description xml:lang="en-US">Bali cattle (Bos javanicus) are native Indonesian cattle, domesticated from banteng (Bibos banteng). Genes that have an important role in meat quality are calcium-activated neutral protease genes, known as calpains (CAPN). The objective of this study was to evaluate the polymophisms of calpain gene SNP g.232 GT by PCR-RFLP technique and its influence on growth trait and meat quality of Bali cattle detected by ultrasound imaging of longissimus dorsi thickness (LDT), back fat thickness (BFT), marbling score (MS), and intramuscular fat percentage (PIMF). The polymorphisms of CAPN1 gene were analyzed by PCR-RFLP using BglII restriction enzyme (n=52 cattle). The ultrasound images of longissimus dorsi muscle were carried out transversally and longitudinal between 12th -13th thoracic vertebrae then analyzed by Image-J NIH software. Result showed that  SNP g.232 GT of CAPN1 gene was polymorphic in Bali cattle. SNP g.232 GT of CAPN1 gene in Bali cattle has higher diversity which was showed of 0.48 heterozygosity value and was in Hardy-Weinberg equilibrium. The polymorphisms of SNP g.232 GT was associated significantly (P0.05) with bodyweight at 730 days, marbling score (MS), and intramuscular fat percentage (PIMF). It suggests that the CAPN1 gene in Bali cattle is a candidate for Marker Assisted Selection (MAS), which influences body weight at 730 days, marbling score, and percentage of intramuscular fat.</dc:description>
	<dc:publisher xml:lang="en-US">APPERTANI</dc:publisher>
	<dc:contributor xml:lang="en-US">IPB University, Department of Animal Production and Technology, Faculty of Animal Science</dc:contributor>
	<dc:date>2021-06-29</dc:date>
	<dc:type>info:eu-repo/semantics/article</dc:type>
	<dc:type>info:eu-repo/semantics/publishedVersion</dc:type>
	<dc:type xml:lang="en-US">Peer-reviewed Article</dc:type>
	<dc:format>application/pdf</dc:format>
	<dc:identifier>https://medpub.appertani.org/index.php/jitv/article/view/2701</dc:identifier>
	<dc:identifier>10.14334/jitv.v26i2.2701</dc:identifier>
	<dc:source xml:lang="en-US">Jurnal Ilmu Ternak dan Veteriner; Vol 26, No 2 (2021): June 2021; 49-56</dc:source>
	<dc:source>2252-696X</dc:source>
	<dc:source>0853-7380</dc:source>
	<dc:language>eng</dc:language>
	<dc:relation>https://medpub.appertani.org/index.php/jitv/article/view/2701/2288</dc:relation>
	<dc:rights xml:lang="en-US">Copyright (c) 2021 Jurnal Ilmu Ternak dan Veteriner</dc:rights>
</oai_dc:dc>