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Biclustering-Based Analysis to Identify Fruit Production Potential in Indonesia Using Plaid Model Algorithm

Scientific Journal of Informatics · Vol. 12 No. 3 (2025) · pp. 429–440

DOI
10.15294/sji.v12i3.25054
ISSN
2407-7658, 2460-0040
Published
2025-09-09
Publisher
Universitas Negeri Semarang
Language
eng

Abstract

Purpose: The application of biclustering using the plaid model aims to simultaneously identify mapping or grouping patterns of provinces and fruit type in Indonesia. The performance evaluation of the plaid model algorithm is used to assess its capability to discover and generate optimal biclusters, thereby representing the relationship between regions and fruit types with similar production characteristics. Methods: The plaid model algorithm produces optimal biclusters by configuring parameter scenarios such as model selection, managing the number of layers, and determining threshold values for rows and columns. The Average Mean Square Residue (MSR) value and the number of biclusters that can provide the most relevant data are used to determine the optimal parameter selection. Result: The plaid model algorithm effectively grouped provinces and fruit varieties into multiple biclusters. The row-constant model was choosen based on the average MSR value of 2.0537, which formed five overlapping biclusters across provinces and fruit types. Several provinces, such as Central Java and West Java, demonstrated a high potential for rose apples, breadfruit, and salak. Other provinces showed comparatively moderate levels of production. Novelty: This study presents a novel way to apply the plaid model biclustering algorithm to data on fruit varieties in various Indonesian provinces. Rarely used in horticulture, this method offers an alternative perspective on structured commodity mapping, especially when identifying specific patterns between fruit varieties and geographic distribution.

Keywords

Collaboration network of the authors

17 authors · 34 co-authorship links · 3 across different organisations

Hover or tap a name to highlight its co-authors. Double-click to open the author's page.

  • IPB University
  • State University of Gorontalo
  • Bandung Islamic University
  • Affiliation unknown
  • Different organisations
  • Same organisation
  • Affiliation unknown
  • Thicker line = more joint articles · bigger circle = more articles
Show as table
Co-authorOrganisationJoint articles
Agus Mohamad SolehIPB University2
Reka Agustia AstariAffiliation unknown1
Anwar FitriantoAffiliation unknown1
Erdanisa Aghnia IlmaniAffiliation unknown1
Yenni AngrainiIPB University1
Adelia Putri PangestikaAffiliation unknown1
Khairil Anwar NotodiputroIPB University1
Utami Dyah SyafitriIPB University1
Fahrezal ZubediState University of Gorontalo1
Asep SaefuddinAffiliation unknown1
Hengki MuradiAffiliation unknown1
Dede Dirgahayu DomiriAffiliation unknown1
Farit Mochamad AfendiIPB University1
Nur Azizah Komara RifaiBandung Islamic University1

Affiliations come from OpenAlex; journal OAI-PMH metadata carries none. Authors without an OpenAlex ID are matched by name, which can merge or split people.

Metadata source: OAI-PMH (metadata jurnal) https://journal.unnes.ac.id/journals/sji/oai, first harvested 6 Nov 2026, last seen 8 Nov 2026.
Original metadata (oai_dc)
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	<dc:title xml:lang="en">Biclustering-Based Analysis to Identify Fruit Production Potential in Indonesia Using Plaid Model Algorithm</dc:title>
	<dc:creator xml:lang="en">Alwani, Nadira Nisa</dc:creator>
	<dc:creator xml:lang="en">Sumertajaya, I Made</dc:creator>
	<dc:creator xml:lang="en">Wigena, Aji Hamim</dc:creator>
	<dc:subject xml:lang="en">Biclustering</dc:subject>
	<dc:subject xml:lang="en">Average Mean Square Residue</dc:subject>
	<dc:subject xml:lang="en">Plaid Model</dc:subject>
	<dc:description xml:lang="en">Purpose: The application of biclustering using the plaid model aims to simultaneously identify mapping or grouping patterns of provinces and fruit type in Indonesia. The performance evaluation of the plaid model algorithm is used to assess its capability to discover and generate optimal biclusters, thereby representing the relationship between regions and fruit types with similar production characteristics.
Methods: The plaid model algorithm produces optimal biclusters by configuring parameter scenarios such as model selection, managing the number of layers, and determining threshold values for rows and columns. The Average Mean Square Residue (MSR) value and the number of biclusters that can provide the most relevant data are used to determine the optimal parameter selection.
Result: The plaid model algorithm effectively grouped provinces and fruit varieties into multiple biclusters. The row-constant model was choosen based on the average MSR value of 2.0537, which formed five overlapping biclusters across provinces and fruit types. Several provinces, such as Central Java and West Java, demonstrated a high potential for rose apples, breadfruit, and salak. Other provinces showed comparatively moderate levels of production.
Novelty: This study presents a novel way to apply the plaid model biclustering algorithm to data on fruit varieties in various Indonesian provinces. Rarely used in horticulture, this method offers an alternative perspective on structured commodity mapping, especially when identifying specific patterns between fruit varieties and geographic distribution.</dc:description>
	<dc:publisher xml:lang="en">Universitas Negeri Semarang</dc:publisher>
	<dc:date>2025-09-09</dc:date>
	<dc:type>info:eu-repo/semantics/article</dc:type>
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	<dc:type xml:lang="en">Peer-reviewed Article</dc:type>
	<dc:format>application/pdf</dc:format>
	<dc:identifier>https://journal.unnes.ac.id/journals/sji/article/view/25054</dc:identifier>
	<dc:identifier>10.15294/sji.v12i3.25054</dc:identifier>
	<dc:source xml:lang="en">Scientific Journal of Informatics; Vol. 12 No. 3: Special Issue; 429-440</dc:source>
	<dc:source>2407-7658</dc:source>
	<dc:source>2460-0040</dc:source>
	<dc:source>10.15294/sji.v12i3</dc:source>
	<dc:language>eng</dc:language>
	<dc:relation>https://journal.unnes.ac.id/journals/sji/article/view/25054/6058</dc:relation>
	<dc:rights xml:lang="en">Copyright (c) 2025 Scientific Journal of Informatics</dc:rights>
</oai_dc:dc>