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Decoding brain tumor insights: Evaluating CAM variants with 3D U-Net for segmentation

Communications in Science and Technology · Vol. 9 No. 2 (2024) · hlm. 262–273

DOI
10.21924/cst.9.2.2024.1477
ISSN
2502-9266, 2502-9258
Terbit
2024-12-31
Penerbit
Komunitas Ilmuwan dan Profesional Muslim Indonesia
Bahasa
eng

Abstrak

Brain tumor segmentation is critical for effective diagnosis and treatment planning. While, conventional manual segmentation techniques are seen inefficient and variable, highlighting the need for automated methods. This study enhances medical image analysis, particularly in brain tumor segmentation by improving the explainability and accuracy of deep learning models, which are essential for clinical trust. Using the 3D U-Net architecture with the BraTS 2020 dataset, the study achieved precise localization and detailed segmentation with the mean recall values of 0.8939 for Whole Tumor (WT), 0.7941 for Enhancing Tumor (ET), and 0.7846 for Tumor Core (TC). The Dice coefficients were 0.9065 for WT, 0.8180 for TC, and 0.7715 for ET. By integrating explainable AI techniques, such as Class Activation Mapping (CAM) and its variants (Grad-CAM, Grad-CAM++, and Score-CAM), the study ensures high segmentation accuracy and transparency. Grad-CAM, in this case, provided the most reliable and detailed visual explanations, significantly enhancing model interpretability for clinical applications. This approach not only enhances the accuracy of brain tumor segmentation but also builds clinical trust by making model decisions more transparent and understandable. Finally, the combination of 3D U-Net and XAI techniques supports more effective diagnosis, treatment planning, and patient care in brain tumor management.

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19 penulis · 42 tautan kepenulisan bersama · 10 lintas organisasi

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  • Universitas Gadjah Mada
  • Muhammadiyah University Purwokerto
  • Sunan Gunung Djati State Islamic University Bandung
  • King Mongkut's Institute of Technology Ladkrabang
  • Muhammadiyah University of Yogyakarta
  • Organisasi berbeda
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Rekan penulisOrganisasiArtikel bersama
Hanung Adi NugrohoUniversitas Gadjah Mada3
Teguh Bharata AdjiUniversitas Gadjah Mada2
Oyas WahyunggoroUniversitas Gadjah Mada2
Adha Imam CahyadiUniversitas Gadjah Mada2
Hendri Himawan TriharmintoUniversitas Gadjah Mada2
Widhia K.Z. OktoeberzaUniversitas Gadjah Mada2
Vesi YulyantiUniversitas Gadjah Mada2
Yenny RahmawatiUniversitas Gadjah Mada2
Kuntpong WoraratpanyaKing Mongkut's Institute of Technology Ladkrabang2
Tri Putri LestariSunan Gunung Djati State Islamic University Bandung1
Rezty Amalia ArasUniversitas Gadjah Mada1
Thea KiranaUniversitas Gadjah Mada1
Vicko PranowoUniversitas Gadjah Mada1
Augustine Herini Tita HutamiUniversitas Gadjah Mada1
Chandra Ramadhan Atmaja PerdanaUniversitas Gadjah Mada1
Etik IrijantiMuhammadiyah University of Yogyakarta1

Afiliasi berasal dari OpenAlex; metadata OAI-PMH jurnal tidak memuatnya. Penulis tanpa ID OpenAlex dicocokkan berdasarkan nama, sehingga dua orang bisa tergabung atau satu orang bisa terpisah.

Sumber metadata: OAI-PMH (metadata jurnal) https://cst.kipmi.or.id/oai, pertama di-harvest 8 Nov 2026, terakhir terlihat 8 Nov 2026.
Metadata asli (oai_dc)
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	<dc:title xml:lang="en-US">Decoding brain tumor insights: Evaluating CAM variants with 3D U-Net for segmentation</dc:title>
	<dc:creator>Hardani, Dian Nova Kusuma</dc:creator>
	<dc:creator>Ardiyanto, Igi</dc:creator>
	<dc:creator>Adi Nugroho, Hanung</dc:creator>
	<dc:subject xml:lang="en-US">brain tumor segmentation</dc:subject>
	<dc:subject xml:lang="en-US">3D U-Net</dc:subject>
	<dc:subject xml:lang="en-US">explainable AI</dc:subject>
	<dc:subject xml:lang="en-US">class activation mapping</dc:subject>
	<dc:subject xml:lang="en-US">deep learning</dc:subject>
	<dc:subject xml:lang="en-US">medical imaging</dc:subject>
	<dc:description xml:lang="en-US">Brain tumor segmentation is critical for effective diagnosis and treatment planning. While, conventional manual segmentation techniques are seen inefficient and variable, highlighting the need for automated methods. This study enhances medical image analysis, particularly in brain tumor segmentation by improving the explainability and accuracy of deep learning models, which are essential for clinical trust. Using the 3D U-Net architecture with the BraTS 2020 dataset, the study achieved precise localization and detailed segmentation with the mean recall values of 0.8939 for Whole Tumor (WT), 0.7941 for Enhancing Tumor (ET), and 0.7846 for Tumor Core (TC). The Dice coefficients were 0.9065 for WT, 0.8180 for TC, and 0.7715 for ET. By integrating explainable AI techniques, such as Class Activation Mapping (CAM) and its variants (Grad-CAM, Grad-CAM++, and Score-CAM), the study ensures high segmentation accuracy and transparency. Grad-CAM, in this case, provided the most reliable and detailed visual explanations, significantly enhancing model interpretability for clinical applications. This approach not only enhances the accuracy of brain tumor segmentation but also builds clinical trust by making model decisions more transparent and understandable. Finally, the combination of 3D U-Net and XAI techniques supports more effective diagnosis, treatment planning, and patient care in brain tumor management.</dc:description>
	<dc:publisher xml:lang="en-US">Komunitas Ilmuwan dan Profesional Muslim Indonesia</dc:publisher>
	<dc:date>2024-12-31</dc:date>
	<dc:type>info:eu-repo/semantics/article</dc:type>
	<dc:type>info:eu-repo/semantics/publishedVersion</dc:type>
	<dc:format>application/pdf</dc:format>
	<dc:identifier>https://cst.kipmi.or.id/journal/article/view/1477</dc:identifier>
	<dc:identifier>10.21924/cst.9.2.2024.1477</dc:identifier>
	<dc:source xml:lang="en-US">Communications in Science and Technology; Vol. 9 No. 2 (2024); 262-273</dc:source>
	<dc:source xml:lang="id-ID">Communications in Science and Technology; Vol 9 No 2 (2024); 262-273</dc:source>
	<dc:source>2502-9266</dc:source>
	<dc:source>2502-9258</dc:source>
	<dc:source>10.21924/cst.9.2.2024</dc:source>
	<dc:language>eng</dc:language>
	<dc:relation>https://cst.kipmi.or.id/journal/article/view/1477/178</dc:relation>
	<dc:rights xml:lang="en-US">Copyright (c) 2024 Communications in Science and Technology</dc:rights>
</oai_dc:dc>