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Phytochemical Screening and In Silico Prediction of Gynura divaricata Ethanolic Extract as A Potential PIM-1 Inhibitor: Phytochemical and In Silico Prediction of Gynura divaricata

Journal of Tropical Life Science : International Journal of Theoretical, Experimental, and Applied Life Sciences · Vol. 16 No. 01 (2026) · hlm. 63–74

DOI
10.11594/jtls.16.01.06
ISSN
2527-4376, 2087-5517
Terbit
2026-06-02
Penerbit
Journal of Tropical Life Science
Bahasa
eng
Lisensi
creativecommons.org/licenses/by-nc/4.0

Abstrak

The pharmacological properties and traditional uses of medicinal plants often correlate with their bioactive constituents, which contribute to diverse therapeutic effects, including anticancer activity. Cancer remains one of the leading causes of mortality worldwide, and the discovery of novel anticancer agents from natural sources continues to be an important research focus. Gynura divaricata is a medicinal herb widely used in traditional Asian medicine for treating diseases. Recent studies have reported that G. divaricata contains several bioactive compounds. such as flavonoids, phenolic acids, terpenoids, and alkaloids, which are known for their antioxidant and anticancer properties. However, despite its traditional use and pharmacological potential, the molecular mechanisms underlying the anticancer activity of G. divaricata remain poorly understood. This study aimed to screen the phytochemical content of the ethanolic leaf extract of G. divaricata and to predict its potential anticancer activity through computational analysis targeting the PIM-1 protein. The DPPH inhibition, total flavonoid content, and total phenolic content of the extract were evaluated. Phytochemical profiling was performed using LC-HRMS. Molecular docking and molecular dynamics simulations were conducted to predict the interactions between the active compounds of G. divaricata and the PIM-1 protein. The extract exhibited 50% DPPH inhibition at a concentration of 2071.01 ppm, with total flavonoid and total phenolic contents of 107.44 ± 4.41 mg QE/g and 10.96 ± 0.49 mg GAE/g, respectively. Identified bioactive compounds, including curcumin, (+)-ar-turmerone, and 4-coumaric acid, were further analyzed through molecular docking to assess their interactions with the PIM-1 kinase. The docking results revealed that these compounds showed favorable binding affinities to the active site of PIM-1, suggesting their potential as anticancer agents. This study is the first to report the potential of G. divaricata active compounds as PIM-1 inhibitors, warranting further validation through both in vitro and in vivo studies.

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  • Universitas Negeri Surabaya
  • University of Brawijaya
  • Universitas Muhammadiyah Malang
  • Universitas Nahdlatul Ulama Pasuruan
  • Universitas Jember
  • National Dong Hwa University
  • The University of Adelaide
  • Organisasi lain
  • Afiliasi tidak diketahui
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Rekan penulisOrganisasiArtikel bersama
Muhaimin Rifa’iUniversity of Brawijaya3
Tutut Indria PermanaUniversitas Muhammadiyah Malang2
Nashi WidodoUniversity of Brawijaya2
An Nuril Maulida FauziahUniversitas Negeri Surabaya1
WasisAfiliasi tidak diketahui1
Muhamad Arif MahdiannurUniversitas Negeri Surabaya1
Mochammad Zumar Firdaus ErmawanUniversitas Negeri Surabaya1
Edi SuwandiNational Dong Hwa University1
Safitri Yosita RatriThe University of Adelaide1
Eko HariyonoUniversitas Negeri Surabaya1
Laily RosdianaUniversitas Negeri Surabaya1
Muhammad SatriawanUniversitas Negeri Surabaya1
Hasna NabilahUniversitas Negeri Surabaya1
Iqbal Ainur RizkiUniversitas Negeri Surabaya1
Wahyu Budi SabtiawanUniversitas Negeri Surabaya1
An Nuril Maulida FauziahUniversitas Negeri Surabaya1
Wasis WasisUniversitas Negeri Surabaya1
Tri RijantoUniversitas Negeri Surabaya1
Kirati Wong-akharawinYala Rajabhat University1
Sofia Nur CahyaniUniversity of Brawijaya1
Belinda Nabiila Al FaizahUniversity of Brawijaya1
Rif’atul Hawani BurhanUniversity of Brawijaya1
Nabila Shafa Yumna SalsabilaUniversity of Brawijaya1
Noviana Dwi LestariUniversitas Muhammadiyah Malang1
Agung Pramana Warih MahendraUniversity of Brawijaya1
Hideo TsuboiNagoya University1
Dyah AstrianiUniversitas Negeri Surabaya1
Alyyah Fikrotun NisaUniversitas Negeri Surabaya1
Ika Nur AiniUniversitas Negeri Surabaya1
Raden Eliza WardhaniUniversitas Negeri Surabaya1
Iffah Nur FauziyahUniversitas Negeri Surabaya1
Firda Nuri AsyhariUniversity of Brawijaya1
Heni Sukma ZulfatimUniversity of Brawijaya1

Afiliasi berasal dari OpenAlex; metadata OAI-PMH jurnal tidak memuatnya. Penulis tanpa ID OpenAlex dicocokkan berdasarkan nama, sehingga dua orang bisa tergabung atau satu orang bisa terpisah.

Sumber metadata: OAI-PMH (metadata jurnal) http://jtrolis.ub.ac.id/index.php/jtrolis/oai, pertama di-harvest 9 Nov 2026, terakhir terlihat 9 Nov 2026.
Metadata asli (oai_dc)
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	<dc:title xml:lang="en">Phytochemical Screening and In Silico Prediction of Gynura divaricata Ethanolic Extract as A Potential PIM-1 Inhibitor: Phytochemical and In Silico Prediction of Gynura divaricata</dc:title>
	<dc:creator xml:lang="en">Puspitarini , Sapti </dc:creator>
	<dc:creator xml:lang="en">Hermanto, Feri Eko</dc:creator>
	<dc:creator xml:lang="en">Rohim, Abd</dc:creator>
	<dc:creator xml:lang="en">Dliyauddin, Moh</dc:creator>
	<dc:creator xml:lang="en">Hendratmoko, Ahmad Fauzi</dc:creator>
	<dc:creator xml:lang="en">Budiyanto, Mohammad</dc:creator>
	<dc:creator xml:lang="en">Ilhami, Fasih Bintang</dc:creator>
	<dc:subject xml:lang="en">Active compound</dc:subject>
	<dc:subject xml:lang="en">anticancer</dc:subject>
	<dc:subject xml:lang="en">antioxidant</dc:subject>
	<dc:subject xml:lang="en">Gynura divaricata</dc:subject>
	<dc:subject xml:lang="en">herbal medicine</dc:subject>
	<dc:subject xml:lang="en">molecular docking</dc:subject>
	<dc:subject xml:lang="en">PIM-1</dc:subject>
	<dc:description xml:lang="en">The pharmacological properties and traditional uses of medicinal plants often correlate with their bioactive constituents, which contribute to diverse therapeutic effects, including anticancer activity. Cancer remains one of the leading causes of mortality worldwide, and the discovery of novel anticancer agents from natural sources continues to be an important research focus. Gynura divaricata is a medicinal herb widely used in traditional Asian medicine for treating diseases. Recent studies have reported that G. divaricata contains several bioactive compounds. such as flavonoids, phenolic acids, terpenoids, and alkaloids, which are known for their antioxidant and anticancer properties. However, despite its traditional use and pharmacological potential, the molecular mechanisms underlying the anticancer activity of G. divaricata remain poorly understood. This study aimed to screen the phytochemical content of the ethanolic leaf extract of G. divaricata and to predict its potential anticancer activity through computational analysis targeting the PIM-1 protein. The DPPH inhibition, total flavonoid content, and total phenolic content of the extract were evaluated. Phytochemical profiling was performed using LC-HRMS. Molecular docking and molecular dynamics simulations were conducted to predict the interactions between the active compounds of G. divaricata and the PIM-1 protein. The extract exhibited 50% DPPH inhibition at a concentration of 2071.01 ppm, with total flavonoid and total phenolic contents of 107.44 ± 4.41 mg QE/g and 10.96 ± 0.49 mg GAE/g, respectively. Identified bioactive compounds, including curcumin, (+)-ar-turmerone, and 4-coumaric acid, were further analyzed through molecular docking to assess their interactions with the PIM-1 kinase. The docking results revealed that these compounds showed favorable binding affinities to the active site of PIM-1, suggesting their potential as anticancer agents. This study is the first to report the potential of G. divaricata active compounds as PIM-1 inhibitors, warranting further validation through both in vitro and in vivo studies.  </dc:description>
	<dc:publisher xml:lang="en">Journal of Tropical Life Science</dc:publisher>
	<dc:date>2026-06-02</dc:date>
	<dc:type>info:eu-repo/semantics/article</dc:type>
	<dc:type>info:eu-repo/semantics/publishedVersion</dc:type>
	<dc:format>application/pdf</dc:format>
	<dc:identifier>https://jtrolis.ub.ac.id/index.php/jtrolis/article/view/3803</dc:identifier>
	<dc:identifier>10.11594/jtls.16.01.06</dc:identifier>
	<dc:source xml:lang="en">Journal of Tropical Life Science; Vol. 16 No. 01 (2026); 63 - 74</dc:source>
	<dc:source>2527-4376</dc:source>
	<dc:source>2087-5517</dc:source>
	<dc:language>eng</dc:language>
	<dc:relation>https://jtrolis.ub.ac.id/index.php/jtrolis/article/view/3803/829</dc:relation>
	<dc:rights xml:lang="en">Copyright (c) 2026 Journal of Tropical Life Science</dc:rights>
	<dc:rights xml:lang="en">https://creativecommons.org/licenses/by-nc/4.0</dc:rights>
</oai_dc:dc>